RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CDC14BO60729 498 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 LILRA1O75019 489 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 NDUFB2O95178 105 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 TGFAP01135 160 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 CST2P09228 141 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 ZNF250P15622 560 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 MSR1P21757 451 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 OMPP47874 163 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 LIMS1P48059 325 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 CHN2P52757 468 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 CCL8P80075 99 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 RIN1Q13671 783 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 ENDOGQ14249 297 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 TMEM154Q6P9G4 183 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 PIGWQ7Z7B1 504 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 DEFB107AQ8IZN7 70 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 FNDC8Q8TC99 324 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 YIPF5Q969M3 257 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 PYURFQ96I23 114 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 POM121L2Q96KW2 1035 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 NSMCE2Q96MF7 247 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 GORASP2Q9H8Y8 452 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 POLE4Q9NR33 117 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 MAGEL2Q9UJ55 1249 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 CDC42EP3Q9UKI2 254 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 SIGLEC7Q9Y286 467 aa12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 FBN1P35555 2871 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-228ENST00000508974 IGLV3-9A0A075B6K5 115 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 UNC119BA6NIH7 251 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 TPD52L2O43399 206 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 DCTN3O75935 186 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 GADD45GO95257 159 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 HSD17B1P14061 328 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 CTLA4P16410 223 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 MPV17P39210 176 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 FXYD6P3P58550 94 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 DBPQ10586 325 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 TSTQ16762 297 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 SAMD4BQ5PRF9 694 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 FOXL2NBQ6ZUU3 175 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 RFPL4BQ6ZWI9 263 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 FAM122BQ7Z309 247 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 ALDH16A1Q8IZ83 802 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 SLC25A40Q8TBP6 338 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 IPCEF1Q8WWN9 437 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 RDH5Q92781 318 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 GPA33Q99795 319 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 SYT4Q9H2B2 425 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 KRCC1Q9NPI7 259 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 HINT3Q9NQE9 182 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 ZNF275Q9NSD4 429 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 EIF3KQ9UBQ5 218 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 GPR160Q9UJ42 338 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 TIMM10BQ9Y5J6 103 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 IER3IP1Q9Y5U9 82 aa12.66□□□□□ -0.38
UBE2D3-228ENST00000508974 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.66□□□□□ -0.383e-7■■■■□ 20.8
UBE2D3-228ENST00000508974 PRSS37A4D1T9 235 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 C12orf71A8MTZ7 269 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 C17orf100A8MU93 164 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 PPIHO43447 177 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 SLC16A7O60669 478 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 PTP4A3O75365 173 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 MPZL1O95297 269 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 PPP1R3DO95685 299 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 GPANK1O95872 356 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 NGFP01138 241 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 SEMG1P04279 462 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 FABP3P05413 133 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 TACSTD2P09758 323 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 ITGA2P17301 1181 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 GCH1P30793 250 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 SDHAP31040 664 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 GPR6P46095 362 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 CENPAP49450 140 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 PCBD1P61457 104 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 TMEM255AQ5JRV8 349 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 C16orf89Q6UX73 402 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 CYP2R1Q6VVX0 501 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 FANK1Q8TC84 345 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 MCUR1Q96AQ8 359 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 OR2J1Q9GZK6 312 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 NRIP3Q9NQ35 241 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 SLCO1C1Q9NYB5 712 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 CD300AQ9UGN4 299 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 COA3Q9Y2R0 106 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 MXRA5Q9NR99 2828 aa12.65□□□□□ -0.38
UBE2D3-228ENST00000508974 WNT9BO14905 357 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 OR10H3O60404 316 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 DOK2O60496 412 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 IFNA2P01563 188 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 FAM157CP0CG43 387 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 ACHEP22303 614 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 RRM2P31350 389 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 HTR5AP47898 357 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 PPP1CBP62140 327 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 ZNF718Q3SXZ3 478 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 AVPI1Q5T686 147 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms