RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 KLK11Q9UBX7 282 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF69Q9UC07 566 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 MTFP1Q9UDX5 166 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 MRM2Q9UI43 246 aaKnown RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 FLVCR2Q9UPI3 526 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF292O60281 2723 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 GVINP1Q7Z2Y8 2422 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 PCNX3Q9H6A9 2034 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 LNP1A1A4G5 178 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 OR2M5A3KFT3 312 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 ADAM10O14672 748 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 ABHD16AO95870 558 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 SSTR2P30874 369 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 AQP2P41181 271 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 RAD52P43351 418 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 LTBQ06643 244 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 CBFBQ13951 182 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 MPPED2Q15777 294 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 ANKRD16Q6P6B7 361 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 CPEB2Q7Z5Q1 589 aaKnown RBP9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 SPERTQ8NA61 448 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 LSM14AQ8ND56 463 aaKnown RBP9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 AGBL5Q8NDL9 886 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 ZPLD1Q8TCW7 415 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 DUSP19Q8WTR2 217 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 ASB17Q8WXJ9 295 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 LPAR4Q99677 370 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 ADAM19Q9H013 955 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 BEX1Q9HBH7 125 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 MRPL15Q9P015 296 aaKnown RBP9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 PIPOXQ9P0Z9 390 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 SESN1Q9Y6P5 492 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 KIF26BQ2KJY2 2108 aa9.91□□□□□ -0.82
SH3RF1-203ENST00000508685 OR4C45A6NMZ5 311 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 ONECUT2O95948 504 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 OR8G3PP0DMU2 310 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 ALOX5APP20292 161 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 CALCRP30988 508 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 LINC00303Q3SY05 128 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 NHLRC3Q5JS37 347 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 C1QL3Q5VWW1 255 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 MTFR2Q6P444 385 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 KRT77Q7Z794 578 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 NAXDQ8IW45 347 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 SERPINA12Q8IW75 414 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF511Q8NB15 262 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 OR2G2Q8NGZ5 317 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 RBPMSQ93062 196 aaKnown RBP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 TAAR8Q969N4 342 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 PNPLA2Q96AD5 504 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 LOXL4Q96JB6 756 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 DCBLD2Q96PD2 775 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 ULBP3Q9BZM4 244 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 ALX4Q9H161 411 aaPredicted RBP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 SLC26A1Q9H2B4 701 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 NARFLQ9H6Q4 476 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 FKRPQ9H9S5 495 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 UPB1Q9UBR1 384 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 PPIEQ9UNP9 301 aaKnown RBP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 LOC105371267A0A1B0GV96 52 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 MCRIP1C9JLW8 97 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 SULT1C2O00338 296 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 BET1O15155 118 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 CDC40O60508 579 aaKnown RBP eCLIP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 EIF4E2O60573 245 aaKnown RBP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 RPP14O95059 124 aaKnown RBP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 ALDOBP05062 364 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 F13BP05160 661 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 MELTFP08582 738 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 TAGLNQ01995 201 aaKnown RBP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 MFSD13AQ14CX5 517 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 TMEM255AQ5JRV8 349 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 EEF1A1P5Q5VTE0 462 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 TMEM205Q6UW68 189 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 GPAT4Q86UL3 456 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 TMPRSS12Q86WS5 348 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF676Q8N7Q3 588 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 OR6N1Q8NGY5 312 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 SFXN2Q96NB2 322 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 INTS14Q96SY0 518 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 SMAD5Q99717 465 aaKnown RBP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 NPAS1Q99742 590 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 TSPAN10Q9H1Z9 355 aaPredicted RBP9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 IKZF2Q9UKS7 526 aa9.9□□□□□ -0.82
SH3RF1-203ENST00000508685 B3GALNT1O75752 331 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 TOXO94900 526 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 AKAIN1P0CW23 69 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 ADRA2CP18825 462 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 PGCP20142 388 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CXCR1P25024 350 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DCTDP32321 178 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CLDN12P56749 244 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC26A5P58743 744 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 SEC61A1P61619 476 aaKnown RBP9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CCDC157Q569K6 752 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CDH26Q8IXH8 852 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 NUBPLQ8TB37 319 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 RHBDD1Q8TEB9 315 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CCDC107Q8WV48 283 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms