RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 VSX1Q9NZR4 365 aaPredicted RBP6.71□□□□□ -1.34
UBE2D3-224ENST00000508474 CXXC1Q9P0U4 656 aaPredicted RBP6.71□□□□□ -1.34
UBE2D3-224ENST00000508474 EMC9Q9Y3B6 208 aa6.71□□□□□ -1.34
UBE2D3-224ENST00000508474 FLVCR1Q9Y5Y0 555 aa6.71□□□□□ -1.34
UBE2D3-224ENST00000508474 SCN11AQ9UI33 1791 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 IGLV3-10A0A075B6K4 115 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ERVH48-1M5A8F1 160 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF264O43296 627 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 MBTPS2O43462 519 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TRAF3IP2O43734 574 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 RPLP1P05386 114 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 C1SP09871 688 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 CSNK1A1P48729 337 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PTTG1IPP53801 180 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 OR2A2Q6IF42 318 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 SLC48A1Q6P1K1 146 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 C8orf82Q6P1X6 216 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TMEM151BQ8IW70 566 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ARRDC1Q8N5I2 433 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TCTEX1D1Q8N7M0 179 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF511Q8NB15 262 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 SLC24A4Q8NFF2 622 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 OR13C5Q8NGS8 318 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 OR5K2Q8NHB8 316 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 HGDQ93099 445 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 NTNG2Q96CW9 530 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 IGSF21Q96ID5 467 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PAAF1Q9BRP4 392 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 DEFB126Q9BYW3 111 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ZMAT3Q9HA38 289 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 GPR173Q9NS66 373 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PLEK2Q9NYT0 353 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TAAR2Q9P1P5 351 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 MTFP1Q9UDX5 166 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 FOXJ3Q9UPW0 622 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 CCDC187A0A096LP49 1063 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 OR5K3A6NET4 321 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TMEM189-UBE2V1I3L0A0 370 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 P2RY10O00398 339 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PLPP2O43688 288 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PTBP3O95758 552 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 IL33O95760 270 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ABHD16AO95870 558 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 GSTP1P09211 210 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 HOXB1P14653 301 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 HMGA2P52926 109 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 MIDNQ504T8 468 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ALKBH2Q6NS38 261 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 FAM57BQ71RH2 274 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 S100A7AQ86SG5 101 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ANGPTL5Q86XS5 388 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF383Q8NA42 475 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF596Q8TC21 504 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 FGGYQ96C11 551 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 FAM210BQ96KR6 192 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 C19orf43Q9BQ61 176 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 RBM24Q9BX46 236 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 KLF16Q9BXK1 252 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 GPR62Q9BZJ7 368 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 EXOGQ9Y2C4 368 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 CCDC163A0A0D9SF12 145 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 C7orf66A4D0T2 115 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ANKRD61A6NGH8 418 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 IGLON5A6NGN9 336 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 OTOL1A6NHN0 477 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TRAPPC2LH3BP13 241 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 HRO43593 1189 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 LILRB3O75022 631 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TRAPPC6AO75865 159 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 CLDN1O95832 211 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ALOX5APP20292 161 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 AKR1C3P42330 323 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 OR1D4P47884 311 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 MTCP1P56278 107 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PCBD1P61457 104 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 EXOSC7Q15024 291 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PNLIPRP3Q17RR3 467 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PLCXD3Q63HM9 321 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TOMM20LQ6UXN7 152 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ALKAL1Q6UXT8 129 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 NPSR1Q6W5P4 371 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TMPPEQ6ZT21 453 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 MRPL21Q7Z2W9 205 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 CAMKMTQ7Z624 323 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TMEM123Q8N131 208 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ZFP62Q8NB50 900 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 GPX8Q8TED1 209 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 SECTM1Q8WVN6 248 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 ADAMTS5Q9UNA0 930 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 MYO18AQ92614 2054 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 FER1L4A9Z1Z3 1794 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TOPAZ1Q8N9V7 1692 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 A0A0U1RQS6 177 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 LOC105371267A0A1B0GV96 52 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PLA2G10O15496 165 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 SMAD6O43541 496 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 MT-ATP6P00846 226 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 CTXN2P0C2S0 81 aa6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 PNRC1Q12796 327 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-224ENST00000508474 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms