RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 GPBAR1Q8TDU6 330 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 DIO2Q92813 273 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM106AQ96A25 262 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 RASD2Q96D21 266 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 HAVCR1Q96D42 359 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 SMIM19Q96E16 107 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 HHIPL1Q96JK4 782 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 NELFAQ9H3P2 528 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 HEATR1Q9H583 2144 aaKnown RBP6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 OPA3Q9H6K4 179 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 A4GALTQ9NPC4 353 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 SRPK3Q9UPE1 567 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 GOLT1BQ9Y3E0 138 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 DYRK1BQ9Y463 629 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 MARCH11A6NNE9 402 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 RIIAD1A6NNX1 92 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 NPIPB9F8W1W9 429 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 NFKBIEO00221 500 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 FGF16O43320 207 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 COCHO43405 550 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 ITGA5P08648 1049 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 OR4A8P0C604 315 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 ELFN1P0C7U0 828 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 SERPINA2P20848 420 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 PSMB6P28072 239 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 FAUP35544 74 aaKnown RBP6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 IFNGR2P38484 337 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 NPY4RP50391 375 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 MLF1P58340 268 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 DCAF7P61962 342 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 ADAM8P78325 824 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 PRSS8Q16651 343 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 C10orf91Q5T1B1 145 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM244Q5VVB8 128 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 RASGEF1AQ8N9B8 481 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 OR2L5Q8NG80 312 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 MARCH1Q8TCQ1 289 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 CDS1Q92903 461 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 DTD2Q96FN9 168 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 PACRGQ96M98 296 aaPredicted RBP6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 WDR92Q96MX6 357 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 ASB16Q96NS5 453 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 CLDND1Q9NY35 253 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC35A3Q9Y2D2 325 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 KLHDC2Q9Y2U9 406 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 SLCO1B1Q9Y6L6 691 aa6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 FNDC1Q4ZHG4 1894 aaPredicted RBP6.58□□□□□ -1.36
LIMCH1-207ENST00000508466 TDRD15B5MCY1 1934 aaKnown RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 GTF3C1Q12789 2109 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 H0YL77 283 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 XRCC3O43542 346 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 CTAG2O75638 210 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 SCGNO76038 276 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 CCKBRP32239 447 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 ERVFRD-1P60508 538 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 PKIAP61925 76 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 RPS23P62266 143 aaKnown RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 SRSF5Q13243 272 aaKnown RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 HNF4GQ14541 408 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 GGNBP1Q5YKI7 109 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF880Q6PDB4 577 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 DBX2Q6ZNG2 339 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC35D2Q76EJ3 337 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 SYT13Q7L8C5 426 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 TAS1R1Q7RTX1 841 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF676Q8N7Q3 588 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 OR56B1Q8NGI3 324 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 OR13C8Q8NGS7 320 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 OR2I1PQ8NGU4 316 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 STT3BQ8TCJ2 826 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 FRZBQ92765 325 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 SPACA5Q96QH8 159 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 CMKLR1Q99788 373 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM208Q9BTX3 173 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 ABHD14AQ9BUJ0 271 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 METTL8Q9H825 291 aaKnown RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 RNF122Q9H9V4 155 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 TAF9BQ9HBM6 251 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 PCYT1BQ9Y5K3 369 aaPredicted RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 CARNS1A5YM72 827 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 KLF8O95600 359 aaPredicted RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 CATP04040 527 aaKnown RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 TRGC1P0CF51 173 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 TUBG1P23258 451 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 GNALP38405 381 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 NKX6-1P78426 367 aaPredicted RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 CCL20P78556 96 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 ACSM1Q08AH1 577 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 RAB32Q13637 225 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 GAS6Q14393 721 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 HAGHQ16775 308 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 DRAM2Q6UX65 266 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 CXCL17Q6UXB2 119 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF705AQ6ZN79 300 aaPredicted RBP6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 GAREM2Q75VX8 874 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC35F2Q8IXU6 374 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 HSD17B11Q8NBQ5 300 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 NECAP1Q8NC96 275 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 OR5AR1Q8NGP9 310 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 Q8WTZ3 238 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms