RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CCL2P13500 99 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 ITIH1P19827 911 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 TMED10P49755 219 aaKnown RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 EMP2P54851 167 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 SLC35A2P78381 396 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 BDH1Q02338 343 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 HSPB2Q16082 182 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 TRMT12Q53H54 448 aaKnown RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 SFRP4Q6FHJ7 346 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 OR4N5Q8IXE1 308 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 BATF2Q8N1L9 274 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 AMER2Q8N7J2 671 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF615Q8N8J6 731 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 OR56B1Q8NGI3 324 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 OR4C15Q8NGM1 316 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 GIPC3Q8TF64 312 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 RAB2BQ8WUD1 216 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF354BQ96LW1 612 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 PACRGQ96M98 296 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 FEVQ99581 238 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 CCDC90BQ9GZT6 254 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF350Q9GZX5 532 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 HDHD2Q9H0R4 259 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 DUSP21Q9H596 190 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 KLHL28Q9NXS3 571 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 SCN3BQ9NY72 215 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 EXOGQ9Y2C4 368 aaKnown RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 TPRKBQ9Y3C4 175 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 NINQ8N4C6 2090 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 ACACBO00763 2458 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 A0A1W2PS29 197 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 FRG2CA6NGY1 282 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 FBLL1A6NHQ2 334 aaKnown RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 SAGE2PA6NJ88 616 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 C17orf105B2RV13 164 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 USP17L23D6RBM5 183 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 IGKV3-11P04433 115 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 IFNA16P05015 189 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 CHRM2P08172 466 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 RPS4Y1P22090 263 aaKnown RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 FMO3P31513 532 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 EMDP50402 254 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 CDH12P55289 794 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 BTG2P78543 158 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 EMX1Q04741 257 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF155Q12901 538 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 MAD2L1BPQ15013 274 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 LTB4RQ15722 352 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 MICAQ29983 383 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 AWAT1Q58HT5 328 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 FGD3Q5JSP0 725 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 PRAMEF5Q5TYX0 476 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 PRAMEF6Q5VXH4 476 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 TNFAIP8L2Q6P589 184 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 CCDC71Q8IV32 467 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 DND1Q8IYX4 353 aaKnown RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 COX18Q8N8Q8 333 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 OR10G2Q8NGC3 310 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 OR52R1Q8NGF1 315 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 OR10J5Q8NHC4 309 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 TMEM186Q96B77 213 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 VSTM2LQ96N03 204 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 SPRY4Q9C004 299 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 VN1R1Q9GZP7 353 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 KCNN2Q9H2S1 579 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 MMP27Q9H306 513 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 GPN2Q9H9Y4 310 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 CLEC2DQ9UHP7 191 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 PTPRBP23467 1997 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ARRDC5A6NEK1 342 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF99A8MXY4 864 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-206ENST00000507875 C21orf140B9A014 251 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 RNF13O43567 381 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 KIAA0513O60268 411 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 SELENOFO60613 162 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 NGFRP08138 427 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 SSTR4P31391 388 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ID1P41134 155 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 PCYT1AP49585 367 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 HMGA2P52926 109 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 CXADRP78310 365 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 HLXQ14774 488 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-206ENST00000507875 MAPK11Q15759 364 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 NPTX1Q15818 432 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 DUSP7Q16829 419 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 NKAPLQ5M9Q1 402 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 DCST2Q5T1A1 773 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 SLC29A4Q7RTT9 530 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ANKRD37Q7Z713 158 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 DTX1Q86Y01 620 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF440Q8IYI8 595 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 SLC5A8Q8N695 610 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 OR5L2Q8NGL0 311 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 NUBPLQ8TB37 319 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF721Q8TF20 911 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF48Q96MX3 618 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-206ENST00000507875 GNRHR2Q96P88 292 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 IP6K3Q96PC2 410 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 CCNL2Q96S94 520 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms