RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 COA3Q9Y2R0 106 aaPredicted RBP14.42□□□□□ -0.1
SNCA-209ENST00000506244 FKBP7Q9Y680 259 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 H3BN98 237 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 TIPRLO75663 272 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 ERCC1P07992 297 aaPredicted RBP14.41□□□□□ -0.1
SNCA-209ENST00000506244 APEX1P27695 318 aaKnown RBP14.41□□□□□ -0.1
SNCA-209ENST00000506244 PCSK6P29122 969 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 RAD52P43351 418 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 CENPAP49450 140 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 PPOXP50336 477 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 PSG4Q00888 419 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 RAB35Q15286 201 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 SWI5Q1ZZU3 235 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 SLC36A3Q495N2 470 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 SLC35F1Q5T1Q4 408 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 SHQ1Q6PI26 577 aaKnown RBP14.41□□□□□ -0.1
SNCA-209ENST00000506244 ATG16L2Q8NAA4 619 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 OR10H5Q8NGA6 315 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 OR52E2Q8NGJ4 325 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 OR8D4Q8NGM9 314 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 NIPSNAP1Q9BPW8 284 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 BCL2L14Q9BZR8 327 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 PLK3Q9H4B4 646 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 EMC7Q9NPA0 242 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 AP4S1Q9Y587 144 aa14.41□□□□□ -0.1
SNCA-209ENST00000506244 ITPR3Q14573 2671 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 IGLV1-36A0A0B4J1U3 117 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 RIIAD1A6NNX1 92 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 DOK2O60496 412 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 COX5BP10606 129 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 CD99P14209 185 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 ZNF3P17036 446 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 FASP25445 335 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 EVX1P49640 407 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 NUDT6P53370 316 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 ATP6AP1Q15904 470 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 KCNMB1Q16558 191 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 RGS7BPQ6MZT1 257 aaPredicted RBP14.4□□□□□ -0.1
SNCA-209ENST00000506244 ARL9Q6T311 187 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 ZBTB46Q86UZ6 589 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 C1orf174Q8IYL3 243 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 OR2T4Q8NH00 348 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 AKR7LQ8NHP1 331 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 MRPL24Q96A35 216 aaKnown RBP14.4□□□□□ -0.1
SNCA-209ENST00000506244 DUS3LQ96G46 650 aaKnown RBP14.4□□□□□ -0.1
SNCA-209ENST00000506244 Q96MF0 132 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 BDH2Q9BUT1 245 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 TEX12Q9BXU0 123 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 WNT5BQ9H1J7 359 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 DYNLRB1Q9NP97 96 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 EIF3KQ9UBQ5 218 aaKnown RBP14.4□□□□□ -0.1
SNCA-209ENST00000506244 ATPIF1Q9UII2 106 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 B9D1Q9UPM9 204 aa14.4□□□□□ -0.1
SNCA-209ENST00000506244 C5orf49A4QMS7 147 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 OR6C68A6NDL8 312 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 SGCEO43556 437 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 GPRIN2O60269 458 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 IGHV4-39P01824 125 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 HLA-DQA2P01906 255 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 GAAP10253 952 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 FOSL1P15407 271 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 CCNOP22674 350 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 SELENOVP59797 346 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 CCNIQ14094 377 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 TMEM179BQ7Z7N9 219 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 HIPK1Q86Z02 1210 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 OR6V1Q8N148 313 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 NPEPL1Q8NDH3 523 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 CPEB3Q8NE35 698 aaKnown RBP14.39□□□□□ -0.11
SNCA-209ENST00000506244 PROKR2Q8NFJ6 384 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 C11orf40Q8WZ69 217 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 POM121L2Q96KW2 1035 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 FOXN4Q96NZ1 517 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 TSSK2Q96PF2 358 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 TMUB1Q9BVT8 246 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 SRA1Q9HD15 236 aaKnown RBP14.39□□□□□ -0.11
SNCA-209ENST00000506244 PLEK2Q9NYT0 353 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 ASH2LQ9UBL3 628 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 KCNG2Q9UJ96 466 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 CELSR1Q9NYQ6 3014 aa14.39□□□□□ -0.11
SNCA-209ENST00000506244 DCTN6O00399 190 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 TP53P04637 393 aaPredicted RBP14.38□□□□□ -0.11
SNCA-209ENST00000506244 LCKP06239 509 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 CSF3P09919 207 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 FAM157BP0CG42 384 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 CCL2P13500 99 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 OSMP13725 252 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 GRK5P34947 590 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 HTR5AP47898 357 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 EFNA4P52798 201 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 CLEC12BQ2HXU8 276 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 MST1LQ2TV78 715 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 ZNF774Q6NX45 483 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 SLC27A4Q6P1M0 643 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 UGT2A3Q6UWM9 527 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 C10orf67Q8IYJ2 551 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 SVOPLQ8N434 492 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 PAQR4Q8N4S7 273 aaPredicted RBP14.38□□□□□ -0.11
SNCA-209ENST00000506244 SLC37A3Q8NCC5 494 aa14.38□□□□□ -0.11
SNCA-209ENST00000506244 SLC26A10Q8NG04 563 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms