RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 PLGRKTQ9HBL7 147 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 RABL2AQ9UBK7 228 aaPredicted RBP4.34□□□□□ -1.71
CHD1-204ENST00000505982 PCYOX1Q9UHG3 505 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 KIF25Q9UIL4 384 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 MMP17Q9ULZ9 603 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 SMAD5-AS1Q9Y6J3 95 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 C10orf71Q711Q0 1435 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 ROBO1Q9Y6N7 1651 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 COL24A1Q17RW2 1714 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 SCN4AP35499 1836 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 FOCADQ5VW36 1801 aa4.34□□□□□ -1.71
CHD1-204ENST00000505982 RAI1Q7Z5J4 1906 aaPredicted RBP4.33□□□□□ -1.72
CHD1-204ENST00000505982 IGLV3-10A0A075B6K4 115 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 SMCO2A6NFE2 343 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 SPOPO43791 374 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 CCDC22O60826 627 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 PFDN1O60925 122 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 CDH16O75309 829 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 OR7A10O76100 309 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 PSMG1O95456 288 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 IFNA8P32881 189 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 HSD17B2P37059 387 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 DYNLL1P63167 89 aaKnown RBP4.33□□□□□ -1.72
CHD1-204ENST00000505982 TGM3Q08188 693 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 ZNF77Q15935 545 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 CAVIN4Q5BKX8 364 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 TNFAIP8L3Q5GJ75 292 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 PRAMEF20Q5VT98 475 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 CARD17Q5XLA6 110 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 OR4F6Q8NGB9 312 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 ERMNQ8TAM6 284 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 ARHGDIGQ99819 225 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 P2RY13Q9BPV8 354 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 GBA3Q9H227 469 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 SH2D2AQ9NP31 389 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 SAR1AQ9NR31 198 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 AIG1Q9NVV5 245 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 GIN1Q9NXP7 522 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 TMEM9Q9P0T7 183 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 LGALS13Q9UHV8 139 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 ASF1AQ9Y294 204 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.33□□□□□ -1.72
CHD1-204ENST00000505982 GMEB1Q9Y692 573 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 COMMD3-BMI1R4GMX3 469 aa4.33□□□□□ -1.72
CHD1-204ENST00000505982 IGSF9BQ9UPX0 1349 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 A0A075B6Q4 140 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 EXOC1LA0A1B0GW35 172 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 A0A1W2PPV9 198 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 SMCO3A2RU48 225 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 RBMY1BA6NDE4 496 aaKnown RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 RBMY1EA6NEQ0 496 aaKnown RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 HAT1O14929 419 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 GYG2O15488 501 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 EDF1O60869 148 aaKnown RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 ZNF780AO75290 641 aaPredicted RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 ENTPD5O75356 428 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 SPAG7O75391 227 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 TTC4O95801 387 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 RBMY1DP0C7P1 496 aaKnown RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 PABPC4LP0CB38 370 aaKnown RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 UBTFL6P0CB48 400 aaPredicted RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 RBMY1A1P0DJD3 496 aaKnown RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 TAC1P20366 129 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 GABRR1P24046 479 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 CCNCP24863 283 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 COILP38432 576 aaPredicted RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 KIR2DS4P43632 304 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 NOVP48745 357 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 ARRB1P49407 418 aaPredicted RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 PRRX1P54821 245 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 DNAJC3Q13217 504 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 DGUOKQ16854 277 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 XKR7Q5GH72 579 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 SPINK14Q6IE38 97 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 IZUMO2Q6UXV1 221 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 TMIGD1Q6UXZ0 262 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 LINC00612Q8N6U2 182 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 PRELID2Q8N945 189 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 OR51S1Q8NGJ8 323 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 OR52K2Q8NGK3 314 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 FANK1Q8TC84 345 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 SETD7Q8WTS6 366 aaKnown RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 C16orf74Q96GX8 76 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 HSFY1Q96LI6 401 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 TSNARE1Q96NA8 513 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 TRABDQ9H4I3 376 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 STARD10Q9Y365 291 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 CSDC2Q9Y534 153 aaKnown RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 RGPD3A6NKT7 1758 aaPredicted RBP4.32□□□□□ -1.72
CHD1-204ENST00000505982 RGPD4Q7Z3J3 1758 aa4.32□□□□□ -1.72
CHD1-204ENST00000505982 SLIT2O94813 1529 aa4.31□□□□□ -1.72
CHD1-204ENST00000505982 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
CHD1-204ENST00000505982 A0A1B0GVG6 124 aa4.31□□□□□ -1.72
CHD1-204ENST00000505982 ANKRD63C9JTQ0 380 aa4.31□□□□□ -1.72
CHD1-204ENST00000505982 HCRTR1O43613 425 aa4.31□□□□□ -1.72
CHD1-204ENST00000505982 SLC37A4O43826 429 aa4.31□□□□□ -1.72
CHD1-204ENST00000505982 TDP2O95551 362 aa4.31□□□□□ -1.72
CHD1-204ENST00000505982 TIMP1P01033 207 aa4.31□□□□□ -1.72
CHD1-204ENST00000505982 KITLGP21583 273 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms