RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RND2P52198 227 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 LOXL1Q08397 574 aaPredicted RBP2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 SNRNP35Q16560 246 aaKnown RBP2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 METTL21CQ5VZV1 264 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 WDR86Q86TI4 376 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 RNF182Q8N6D2 247 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 DEDD2Q8WXF8 326 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 TPD52L3Q96J77 140 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 OR5B12Q96R08 314 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 CENPKQ9BS16 269 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 PARP12Q9H0J9 701 aaKnown RBP2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 SAV1Q9H4B6 383 aaPredicted RBP2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 FAM49BQ9NUQ9 324 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 GPATCH2LQ9NWQ4 482 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 CTSFQ9UBX1 484 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 RFNGQ9Y644 331 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 PLA2R1Q13018 1463 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 TNS2Q63HR2 1409 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 DENND4AQ7Z401 1863 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 HEATR9A2RTY3 570 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 XKRY2A2RUG3 117 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 SGK1O00141 431 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 RAD51BO15315 384 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 CLOCKO15516 846 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 FOXH1O75593 365 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 UBTFL6P0CB48 400 aaPredicted RBP2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 CALRP27797 417 aaKnown RBP2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 FOXN2P32314 431 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 GPX4P36969 197 aaPredicted RBP2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 CEACAM3P40198 252 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 ACLYP53396 1101 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 ADARB1P78563 741 aaKnown RBP2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 HMGN5P82970 282 aaKnown RBP2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 RCAN2Q14206 197 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 FAM78AQ5JUQ0 283 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 THEM4Q5T1C6 240 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 SLC8B1Q6J4K2 584 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 IGFL1Q6UW32 110 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 TAS2R42Q7RTR8 314 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 PRELID2Q8N945 189 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 OR56B2PQ8NGI1 322 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF461Q8TAF7 563 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 NEURL3Q96EH8 262 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 LINC00477Q96M19 166 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 ILKAPQ9H0C8 392 aaPredicted RBP2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 RACGAP1Q9H0H5 632 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 WFDC1Q9HC57 220 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 ADAMTS13Q76LX8 1427 aa2.24□□□□□ -2.05
TOPBP1-204ENST00000505804 GAKO14976 1311 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 NOTCH2Q04721 2471 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 IGLV2-18A0A075B6J9 118 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 TMEM223A0PJW6 202 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 SERPINE3A8MV23 424 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 AIM2O14862 343 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 NUPL2O15504 423 aaKnown RBP2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF207O43670 478 aaKnown RBP2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 RBBP9O75884 186 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 OR56A5P0C7T3 313 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 LINC00869P0C866 280 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 F2RP25116 425 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 CX3CR1P49238 355 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 MRPL23Q16540 153 aaKnown RBP2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 SOHLH1Q5JUK2 328 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 PPM1LQ5SGD2 360 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF880Q6PDB4 577 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 TMEM205Q6UW68 189 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 SHISA6Q6ZSJ9 500 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 LGI3Q8N145 548 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 COQ8AQ8NI60 647 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 ESR2Q92731 530 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 OR10C1Q96KK4 312 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF578Q96N58 590 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF382Q96SR6 550 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 TMEM9BQ9NQ34 198 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 UXTQ9UBK9 157 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 GGA2Q9UJY4 613 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 AKNAQ7Z591 1439 aa2.23□□□□□ -2.05
TOPBP1-204ENST00000505804 IGLV1-36A0A0B4J1U3 117 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 C7orf66A4D0T2 115 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 FAM47DPA6NHR8 397 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF716A6NP11 495 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 KLHL41O60662 606 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 GCM2O75603 506 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 SNX4O95219 450 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 ACSM4P0C7M7 580 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF735P0CB33 412 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 PBLDP30039 288 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 CDH6P55285 790 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 CDH17Q12864 832 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 COX19Q49B96 90 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 ORMDL2Q53FV1 153 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 SMUG1Q53HV7 270 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 XKR7Q5GH72 579 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 CERS6Q6ZMG9 384 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 FAM43BQ6ZT52 329 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 HMGN2P46Q86SG4 172 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 OR7G2Q8NG99 324 aa2.22□□□□□ -2.05
TOPBP1-204ENST00000505804 OR8U1Q8NH10 309 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms