RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 EIF4E1BA6NMX2 242 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 ARHGEF9O43307 516 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 SERPINA5P05154 406 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CCL1P22362 96 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CSNK2BP67870 215 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 PSG4Q00888 419 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF85Q03923 595 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 EGR3Q06889 387 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 DOC2BQ14184 412 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CFAP77Q6ZQR2 320 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CPOQ8IVL8 374 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CA5BP1Q8WTZ4 195 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 UBE2FQ969M7 185 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 PLEKHF2Q9H8W4 249 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 PSORS1C1Q9UIG5 152 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 KLHDC2Q9Y2U9 406 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 GLO1Q04760 184 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 EFNB3Q15768 340 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CLEC12AQ5QGZ9 265 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CNEP1R1Q8N9A8 125 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 PLPP7Q8NBV4 271 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 TSSK2Q96PF2 358 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 RBP7Q96R05 134 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF442Q9H7R0 627 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 RPRD1BQ9NQG5 326 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 PAK1IP1Q9NWT1 392 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CRIM1Q9NZV1 1036 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 DPRXA6NFQ7 191 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 H7C1C5 153 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CALCRP30988 508 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF84P51523 738 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 GABARAPL2P60520 117 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 LCN6P62502 163 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CD47Q08722 323 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 RAB40BQ12829 278 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 HIKESHIQ53FT3 197 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 MBNL2Q5VZF2 373 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 KLHL24Q6TFL4 600 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 DTX2Q86UW9 622 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 JAZF1Q86VZ6 243 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF184Q99676 751 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 CDCA4Q9BXL8 241 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 YTHDF1Q9BYJ9 559 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 UBAP1Q9NZ09 502 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 IGLV3-9A0A075B6K5 115 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 LOC100509620A0A075B734 347 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 A6NNC1 897 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 PRR23D1E9PI22 279 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 SLC16A7O60669 478 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ENTPD6O75354 484 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 MPZL1O95297 269 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 HTR1AP08908 422 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 SBK2P0C263 348 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 CCDC159P0C7I6 412 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 PRR23D2P0DMB1 279 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 CD37P11049 281 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ANOS1P23352 680 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 RPL4P36578 427 aaKnown RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 CDC42P60953 191 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 PPA1Q15181 289 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 FBXW10Q5XX13 1052 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 LGALS12Q96DT0 336 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 WDR76Q9H967 626 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 DIMT1Q9UNQ2 313 aaKnown RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF469Q96JG9 3925 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 C12orf71A8MTZ7 269 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 OVOL3O00110 214 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 XKRYO14609 159 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 CTAG2O75638 210 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ADH4P08319 380 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 PCBD1P61457 104 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 SLC35A2P78381 396 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 TGFBR3Q03167 851 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 LCN1P1Q5VSP4 162 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 PLBD1Q6P4A8 553 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 MDP1Q86V88 176 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 DHRSXQ8N5I4 330 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 IL17RDQ8NFM7 739 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 MED20Q9H944 212 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 COPS3Q9UNS2 423 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 PCDHGB5Q9Y5G0 923 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 PTBP3O95758 552 aaKnown RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF250P15622 560 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 CDAP32320 146 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 WNT5AP41221 380 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 SWI5Q1ZZU3 235 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 MST1LQ2TV78 715 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 DNM1P46Q6ZS02 220 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 SETD9Q8NE22 299 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 MBD6Q96DN6 1003 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 RADILQ96JH8 1075 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 RIBC2Q9H4K1 309 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 TIMM10BQ9Y5J6 103 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 TPRP12270 2363 aaKnown RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 CSMD2Q7Z408 3487 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 IGHV2OR16-5A0A0B4J2B6 119 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 SULT1C4O75897 302 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 LYZL6O75951 148 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ACSM4P0C7M7 580 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms