RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ALG10	Q5BKT4	473 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	NHLRC1	Q6VVB1	395 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	CXXC5	Q7LFL8	322 aa	Known RBP	12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	GPR141	Q7Z602	305 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	BIVM	Q86UB2	503 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	DTX2	Q86UW9	622 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	SATL1	Q86VE3	508 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	SCAI	Q8N9R8	606 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	SGCD	Q92629	289 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	COX4I2	Q96KJ9	171 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	NELFA	Q9H3P2	528 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	MRPL39	Q9NYK5	338 aa	Known RBP	12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	KLHL21	Q9UJP4	597 aa		12.85	□□□□□ -0.35
CNBP-208	ENST00000504813	MCIDAS	D6RGH6	385 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	PRR23D1	E9PI22	279 aa	Predicted RBP	12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	WNT11	O96014	354 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	MT-ND2	P03891	347 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	CDK1	P06493	297 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	PRR23D2	P0DMB1	279 aa	Predicted RBP	12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	HLA-DOB	P13765	273 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	TTK	P33981	857 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	CDKN1A	P38936	164 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	AQP2	P41181	271 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	ALDH3B2	P48448	385 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	ROR2	Q01974	943 aa	Known RBP	12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	ST3GAL4	Q11206	333 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	FHL1	Q13642	323 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	C1D	Q13901	141 aa	Known RBP	12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	TBRG1	Q3YBR2	411 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	NXNL2	Q5VZ03	156 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	SLC22A25	Q6T423	547 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	B3GLCT	Q6Y288	498 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	GID4	Q8IVV7	300 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	TMEM123	Q8N131	208 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	OR5J2	Q8NH18	312 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	BCL2L2	Q92843	193 aa	Predicted RBP	12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	OR2M2	Q96R28	347 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	GPX7	Q96SL4	187 aa	Predicted RBP	12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	OBP2B	Q9NPH6	170 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	FKBP14	Q9NWM8	211 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	IER3IP1	Q9Y5U9	82 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	SETD2	Q9BYW2	2564 aa	Predicted RBP	12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	NF1	P21359	2839 aa		12.84	□□□□□ -0.35
CNBP-208	ENST00000504813	TRIM64B	A6NI03	449 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813		H7C1Q1	480 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	ARPC3	O15145	178 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	SLC43A1	O75387	559 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	HTR1A	P08908	422 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	DBT	P11182	482 aa	Known RBP	12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	JUNB	P17275	347 aa	Predicted RBP	12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	ZNF91	Q05481	1191 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	RPL18	Q07020	188 aa	Known RBP	12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	PMS2P3	Q13401	168 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	KLHL24	Q6TFL4	600 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	IGFN1	Q86VF2	1251 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	CPO	Q8IVL8	374 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	UEVLD	Q8IX04	471 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	MOSPD2	Q8NHP6	518 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	RORB	Q92753	470 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	TRMT61A	Q96FX7	289 aa	Known RBP	12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	TMEM80	Q96HE8	168 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	RHNO1	Q9BSD3	238 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	FAIM	Q9NVQ4	179 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	PCDHGB1	Q9Y5G3	927 aa		12.83	□□□□□ -0.35
CNBP-208	ENST00000504813	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	CCDC160	A6NGH7	325 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	PLPP3	O14495	311 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	IMPA2	O14732	288 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	SLC2A10	O95528	541 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	FADS2	O95864	444 aa	Known RBP	12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	CD14	P08571	375 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	ADORA3	P0DMS8	318 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	APEH	P13798	732 aa	Known RBP	12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	MTNR1A	P48039	350 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	SH3BGR	P55822	239 aa	Predicted RBP	12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	CTXN1	P60606	82 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	ERVK-25	P63136	954 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	PUDP	Q08623	228 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	PHYHD1	Q5SRE7	291 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	AADACL4	Q5VUY2	407 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	C11orf71	Q6IPW1	123 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	PLBD1	Q6P4A8	553 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	ANKRD16	Q6P6B7	361 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	WDFY1	Q8IWB7	410 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	FCGR1B	Q92637	280 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	ZNF837	Q96EG3	531 aa	Predicted RBP	12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	DHRS9	Q9BPW9	319 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	EMC6	Q9BV81	110 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	KATNB1	Q9BVA0	655 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	GPR35	Q9HC97	309 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	NRIP3	Q9NQ35	241 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	GRHPR	Q9UBQ7	328 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	POU2F3	Q9UKI9	436 aa		12.83	□□□□□ -0.36
CNBP-208	ENST00000504813	CR1	P17927	2039 aa		12.82	□□□□□ -0.36
CNBP-208	ENST00000504813		A0A096LPE4	126 aa		12.82	□□□□□ -0.36
CNBP-208	ENST00000504813	IGHV1-18	A0A0C4DH31	117 aa		12.82	□□□□□ -0.36
CNBP-208	ENST00000504813		A0A1W2PPZ6	126 aa		12.82	□□□□□ -0.36
CNBP-208	ENST00000504813	SLC35F4	A4IF30	521 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms