RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 NOSIPQ9Y314 301 aaKnown RBP8.98□□□□□ -0.97
DDX41-203ENST00000504781 IGKV1D-43A0A0B4J1Z2 117 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 TRBV2A0A0J9YWF9 115 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 RPL36A-HNRNPH2H7BZ11 118 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 GPX5O75715 221 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 LALBAP00709 142 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 NTF4P34130 210 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 CD79BP40259 229 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 SELENOPP49908 381 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 CCR9P51686 369 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 VBP1P61758 197 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 MRPS34P82930 218 aaKnown RBP8.97□□□□□ -0.97
DDX41-203ENST00000504781 FMODQ06828 376 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 DBPQ10586 325 aaPredicted RBP8.97□□□□□ -0.97
DDX41-203ENST00000504781 LSAMPQ13449 338 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 DOC2BQ14184 412 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 EIF2B1Q14232 305 aaKnown RBP8.97□□□□□ -0.97
DDX41-203ENST00000504781 DGUOKQ16854 277 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 TP53I3Q53FA7 332 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 FAM27BQ5VT28 67 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 LIPNQ5VXI9 398 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 LYPD4Q6UWN0 246 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 PAMR1Q6UXH9 720 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 FAM220AQ7Z4H9 259 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 KRT77Q7Z794 578 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 SYT9Q86SS6 491 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.97□□□□□ -0.97
DDX41-203ENST00000504781 YIPF7Q8N8F6 280 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 TEX19Q8NA77 164 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 KBTBD8Q8NFY9 601 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 ABHD4Q8TB40 342 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 RPS4Y2Q8TD47 263 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 DACH2Q96NX9 599 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 TAAR6Q96RI8 345 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 CHCHD6Q9BRQ6 235 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 MED18Q9BUE0 208 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 ABHD6Q9BV23 337 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 RBM24Q9BX46 236 aaKnown RBP8.97□□□□□ -0.97
DDX41-203ENST00000504781 ULBP2Q9BZM5 246 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 NELFAQ9H3P2 528 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 NIPAL2Q9H841 368 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 POLE4Q9NR33 117 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 MRM2Q9UI43 246 aaKnown RBP8.97□□□□□ -0.97
DDX41-203ENST00000504781 GNG8Q9UK08 70 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 LIPGQ9Y5X9 500 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 MED12Q93074 2177 aa8.97□□□□□ -0.97
DDX41-203ENST00000504781 FLNBO75369 2602 aaKnown RBP8.97□□□□□ -0.97
DDX41-203ENST00000504781 TENM4Q6N022 2769 aa8.96□□□□□ -0.97
DDX41-203ENST00000504781 SETXQ7Z333 2677 aaKnown RBP8.96□□□□□ -0.97
DDX41-203ENST00000504781 SLC22A20A6NK97 555 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 E9PI62 339 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 K7EM74 188 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 UPK3AO75631 287 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 GATBO75879 557 aaKnown RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 GPANK1O95872 356 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 PDGFAP04085 211 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 SPARCP09486 303 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 GABRA1P14867 456 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 ZNF182P17025 639 aaPredicted RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 MSR1P21757 451 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 CTSSP25774 331 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 PTGER4P35408 488 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 RIDAP52758 137 aaKnown RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 PMP22Q01453 160 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 TLE1Q04724 770 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 ALKBH1Q13686 389 aaKnown RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 SPCS2Q15005 226 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 CDK5R1Q15078 307 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 SGCAQ16586 387 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 MEP1BQ16820 701 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 PHYHD1Q5SRE7 291 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 UNQ9370/PRO34162Q6UXP9 181 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 ABHD12BQ7Z5M8 362 aaPredicted RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 TUSC5Q8IXB3 177 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 GJC3Q8NFK1 279 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 OR52N5Q8NH56 324 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 FNDC9Q8TBE3 224 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 DYNC2LI1Q8TCX1 351 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 ST7LQ8TDW4 575 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 ABHD3Q8WU67 409 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 GHSRQ92847 366 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 RPL3LQ92901 407 aaKnown RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 WNT2BQ93097 391 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 ZNF775Q96BV0 537 aaPredicted RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 SMIM19Q96E16 107 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 GMPPAQ96IJ6 420 aaPredicted RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 KCTD7Q96MP8 289 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 KCNN2Q9H2S1 579 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 SLCO5A1Q9H2Y9 848 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 ELOVL3Q9HB03 270 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 TXNL4BQ9NX01 149 aaKnown RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 ST6GALNAC2Q9UJ37 374 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 IKZF2Q9UKS7 526 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 UGT2A1Q9Y4X1 527 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 SIRT4Q9Y6E7 314 aaPredicted RBP8.96□□□□□ -0.98
DDX41-203ENST00000504781 A3GALT2U3KPV4 340 aa8.96□□□□□ -0.98
DDX41-203ENST00000504781 PHF3Q92576 2039 aaKnown RBP8.95□□□□□ -0.98
DDX41-203ENST00000504781 DNAJC13O75165 2243 aa8.95□□□□□ -0.98
DDX41-203ENST00000504781 LOC100506127A0A0U1RQW1 187 aa8.95□□□□□ -0.98
DDX41-203ENST00000504781 A0A1B0GTH9 108 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms