RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 IVDP26440 423 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 PSMB6P28072 239 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CD40LGP29965 261 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 UGT2B10P36537 528 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ARR3P36575 388 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 PTGDSP41222 190 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 P2RY2P41231 377 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CLDN6P56747 220 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 RIPPLY3P57055 190 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 LYZP61626 148 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 RPS14P62263 151 aaKnown RBP1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF45Q02386 682 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SIGLEC14Q08ET2 396 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 PIGHQ14442 188 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ARL6IP1Q15041 203 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 TSC22D1Q15714 1073 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF79Q15937 498 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 GABRA6Q16445 453 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 RPEL1Q2QD12 228 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 EOGTQ5NDL2 527 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF691Q5VV52 312 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CTRB2Q6GPI1 263 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 C8orf74Q6P047 294 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 PLEKHG7Q6ZR37 379 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ABHD12BQ7Z5M8 362 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CYP4Z1Q86W10 505 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 PPP1R27Q86WC6 154 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SKA3Q8IX90 412 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 C12orf56Q8IXR9 622 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SVOPLQ8N434 492 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ACOT4Q8N9L9 421 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF740Q8NDX6 193 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR6N2Q8NGY6 317 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR2G2Q8NGZ5 317 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 LGALS14Q8TCE9 139 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SLC7A13Q8TCU3 470 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CXorf40AQ8TE69 158 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 GTF2H4Q92759 462 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SMARCD2Q92925 531 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 PHYHIPLQ96FC7 376 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CPB2Q96IY4 423 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 OXGR1Q96P68 337 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZIM3Q96PE6 472 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 TBX15Q96SF7 602 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 NICN1Q9BSH3 213 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 RNF126Q9BV68 326 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 FAIM2Q9BWQ8 316 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CHID1Q9BWS9 393 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SPZ1Q9BXG8 430 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 ULBP2Q9BZM5 246 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 NEUROG2Q9H2A3 272 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SYT4Q9H2B2 425 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SAV1Q9H4B6 383 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SIAEQ9HAT2 523 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 PATZ1Q9HBE1 687 aaKnown RBP1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 RETNQ9HD89 108 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CD209Q9NNX6 404 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 PRSS16Q9NQE7 514 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SDHAF3Q9NRP4 125 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 MCUBQ9NWR8 336 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CLN6Q9NWW5 311 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 GIN1Q9NXP7 522 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 STMN3Q9NZ72 180 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 CD274Q9NZQ7 290 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SLC17A7Q9P2U7 560 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 LGALS13Q9UHV8 139 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 POFUT2Q9Y2G5 429 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 FADS3Q9Y5Q0 445 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 V9GYY9 64 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 SBNO1A3KN83 1393 aa1.72□□□□□ -2.13
HMGB1P35-201ENST00000503360 UBN2Q6ZU65 1347 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 A0A0A6YYH2 397 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 GLYATL1P3A0A0U1RQE8 302 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 A0A1B0GW15 77 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TSPAN11A1L157 253 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM213A2RRL7 107 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 A6NJ64 397 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 USP27XA6NNY8 438 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 F8VZ95 297 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 K7N7A8 449 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 DCTN6O00399 190 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PLPP1O14494 284 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 EMC8O43402 210 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 MGRN1O60291 552 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 MPDU1O75352 247 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 NDUFS6O75380 124 aaKnown RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 AHSA1O95433 338 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 CD160O95971 181 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TIMP1P01033 207 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 FGGP02679 453 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 SERPINA5P05154 406 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 GLAP06280 429 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 RHOCP08134 193 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACSM4P0C7M7 580 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUX4L4P0CJ87 422 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PNMA6AP0CW24 399 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 GFAPP14136 432 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PSMC3P17980 439 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TBPP20226 339 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 SYT1P21579 422 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms