RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 EMC7Q9NPA0 242 aa15.75■□□□□ 0.11
PDLIM7-209ENST00000503346 RPRD1BQ9NQG5 326 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-209ENST00000503346 SPEF1Q9Y4P9 236 aa15.75■□□□□ 0.11
PDLIM7-209ENST00000503346 VSTM5A8MXK1 200 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 OR4A8P0C604 315 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 ATP5J2P56134 94 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 ACTR3P61158 418 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 GALK2Q01415 458 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 VHLLQ6RSH7 139 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 PAQR4Q8N4S7 273 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 OR5K1Q8NHB7 308 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 AKR7LQ8NHP1 331 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 TEX47Q8TBZ9 253 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 C11orf40Q8WZ69 217 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 BDH2Q9BUT1 245 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 CACNG6Q9BXT2 260 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 CDH20Q9HBT6 801 aa15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 SRA1Q9HD15 236 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-209ENST00000503346 PRRC2AP48634 2157 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 B9A039 149 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 H3BN98 237 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 MPZL1O95297 269 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 BMP4P12644 408 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 CCL2P13500 99 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 OSMP13725 252 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 STOMP27105 288 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 APEX1P27695 318 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 APLNRP35414 380 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 GLRXP35754 106 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 GLO1Q04760 184 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 SCRN3Q0VDG4 424 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 AQP6Q13520 282 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 Q5PR19 223 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 FAHD1Q6P587 224 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 TGIF2LYQ8IUE0 185 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 ALDH16A1Q8IZ83 802 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 ATG16L2Q8NAA4 619 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 SLC37A3Q8NCC5 494 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 DNAJC9Q8WXX5 260 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 POM121L2Q96KW2 1035 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 KLHL21Q9UJP4 597 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 PLCE1Q9P212 2302 aa15.73■□□□□ 0.11
PDLIM7-209ENST00000503346 H7C417 338 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 COX5BP10606 129 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 PCSK6P29122 969 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 GRK5P34947 590 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 RPS23P62266 143 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 KPNB1Q14974 876 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 ZNF774Q6NX45 483 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 YTHDF3Q7Z739 585 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 HIPK1Q86Z02 1210 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 CYB561A3Q8NBI2 242 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 WFDC11Q8NEX6 87 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 SLC26A10Q8NG04 563 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 LRTOMTQ8WZ04 291 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 RBM4Q9BWF3 364 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 FN3KQ9H479 309 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 PLK3Q9H4B4 646 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 CMC2Q9NRP2 79 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 CMAHPQ9Y471 501 aa15.72■□□□□ 0.11
PDLIM7-209ENST00000503346 LOC100509620A0A075B734 347 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 GPRIN2O60269 458 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 GPANK1O95872 356 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 IFNGP01579 166 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 TFP02787 698 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 CENPAP49450 140 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 GDI2P50395 445 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 SLC25A1P53007 311 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 SNRPD2P62316 118 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 DBPQ10586 325 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 CRMP1Q14194 572 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 OTPQ5XKR4 325 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 SLC27A4Q6P1M0 643 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 AMIGO2Q86SJ2 522 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 IQCF1Q8N6M8 205 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 OR2T4Q8NH00 348 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 MRPL24Q96A35 216 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 NMNAT2Q9BZQ4 307 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 ASH2LQ9UBL3 628 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 FBXO9Q9UK97 447 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 NDRG4Q9ULP0 352 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 PMF1-BGLAPU3KQ54 211 aa15.71■□□□□ 0.11
PDLIM7-209ENST00000503346 HEATR1Q9H583 2144 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 TMEM129A0AVI4 362 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 C5orf49A4QMS7 147 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 FAM171A2A8MVW0 826 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 G3V2T6 193 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 SGCEO43556 437 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 ICMTO60725 284 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 IGHV4-39P01824 125 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 POU1F1P28069 291 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 RAD52P43351 418 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 EVX1P49640 407 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 DAPP51397 102 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 UCP2P55851 309 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 CDK5Q00535 292 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 TEKQ02763 1124 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 MEP1BQ16820 701 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 MSMPQ1L6U9 139 aa15.7■□□□□ 0.1
PDLIM7-209ENST00000503346 VASH1Q7L8A9 365 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms