RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 RBMS3Q6XE24 437 aaKnown RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 TSPYL5Q86VY4 417 aaPredicted RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 CALHM3Q86XJ0 350 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 RBM45Q8IUH3 476 aaKnown RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 RNF113BQ8IZP6 322 aaKnown RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 MUC20Q8N307 709 aaPredicted RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 KLHL36Q8N4N3 616 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC25A40Q8TBP6 338 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 RNF217Q8TC41 542 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC26A7Q8TE54 656 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 TMEM239Q8WW34 195 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 DACT3Q96B18 629 aaPredicted RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 SGTBQ96EQ0 304 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 MAGEB18Q96M61 343 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 RBP7Q96R05 134 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC6A7Q99884 636 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 GAL3ST1Q99999 423 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 OR2H1Q9GZK4 316 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 OR2J1Q9GZK6 312 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 NARFLQ9H6Q4 476 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 LPAR2Q9HBW0 351 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 CCNB1IP1Q9NPC3 277 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 ESM1Q9NQ30 184 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 PURGQ9UJV8 347 aaKnown RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 FZR1Q9UM11 496 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 LRCH1Q9Y2L9 728 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 MED31Q9Y3C7 131 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 MMP24Q9Y5R2 645 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 INSIG2Q9Y5U4 225 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 ARHGAP32A7KAX9 2087 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 C5orf49A4QMS7 147 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 ZSCAN5BA6NJL1 495 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 C12orf71A8MTZ7 269 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 SURF4O15260 269 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 F13BP05160 661 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 MAKP20794 623 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 GSTM3P21266 225 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 MSR1P21757 451 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 TNFSF4P23510 183 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 IFNA8P32881 189 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 MDH2P40926 338 aaKnown RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 GUCA1AP43080 201 aaPredicted RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 RPL27P61353 136 aaKnown RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 PPP1CBP62140 327 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 BTG1P62324 171 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 PAX2Q02962 417 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 SCRN3Q0VDG4 424 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 ST3GAL3Q11203 375 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 PSG7Q13046 419 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 CYLC2Q14093 348 aaPredicted RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 ALG10Q5BKT4 473 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 TMEM255AQ5JRV8 349 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 ZNF362Q5T0B9 420 aaPredicted RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 AVPI1Q5T686 147 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 NANOGP8Q6NSW7 305 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 SLC27A4Q6P1M0 643 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 NKAIN4Q8IVV8 208 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 LRRC18Q8N456 261 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 LRRC75AQ8NAA5 344 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 PCYOX1LQ8NBM8 494 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 OR10A6Q8NH74 314 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 CCL17Q92583 94 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 HDAC2Q92769 488 aaKnown RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 PTP4A1Q93096 173 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 UPRTQ96BW1 309 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 THOC1Q96FV9 657 aaKnown RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 C4orf45Q96LM5 186 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 PRRC1Q96M27 445 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 SIGLEC11Q96RL6 698 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 DCLRE1CQ96SD1 692 aaKnown RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 ANKRD19PQ9H560 264 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 C20orf141Q9NUB4 165 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 TMEM106BQ9NUM4 274 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 RIMS3Q9UJD0 308 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 AP3M1Q9Y2T2 418 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 AUP1Q9Y679 476 aa5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 V9GYY5 206 aaPredicted RBP5.15□□□□□ -1.59
LSM3P4-201ENST00000502948 MGAM2Q2M2H8 2515 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 IGKV1D-43A0A0B4J1Z2 117 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 BBIP1A8MTZ0 92 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 TRAPPC2LH3BP13 241 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 KPNA4O00629 521 aaPredicted RBP5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 TPD52L2O43399 206 aaKnown RBP5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 SLC2A10O95528 541 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 PLATP00750 562 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 NGFP01138 241 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 OPN1SWP03999 348 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 WNT2P09544 360 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 RAC2P15153 192 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 ZFP36P26651 326 aaKnown RBP5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 LAP3P28838 519 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 MPV17P39210 176 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 AQP2P41181 271 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 GATA4P43694 442 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 MTNR1AP48039 350 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 RGS6P49758 472 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 MTPNP58546 118 aa5.14□□□□□ -1.59
LSM3P4-201ENST00000502948 TAS2R41P59536 307 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms