RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 CNTN4Q8IWV2 1026 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 CLDN19Q8N6F1 224 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 BCORP1Q8N888 145 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 MINDY2Q8NBR6 621 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 MSANTD4Q8NCY6 345 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 WFDC11Q8NEX6 87 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 STXBP6Q8NFX7 210 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 OR52E1Q8NGJ3 308 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 OR1N2Q8NGR9 330 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 OR56B4Q8NH76 319 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 OR9G1Q8NH87 305 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 CNIH3Q8TBE1 160 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 M1APQ8TC57 530 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 PAQR8Q8TEZ7 354 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 HTR3CQ8WXA8 447 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 RAPGEF5Q92565 580 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 ARPC1AQ92747 370 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 TMEM186Q96B77 213 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 MED8Q96G25 268 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 HPDLQ96IR7 371 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 FCRL1Q96LA6 429 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 PGLYRP4Q96LB8 373 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 SPATA13Q96N96 652 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 CCNL2Q96S94 520 aaPredicted RBP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 ATP6V0BQ99437 205 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 GPA33Q99795 319 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 CCT7Q99832 543 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 KLHDC3Q9BQ90 382 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 TUBGCP2Q9BSJ2 902 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 FICDQ9BVA6 458 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 ACAT2Q9BWD1 397 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 UPF3BQ9BZI7 483 aaKnown RBP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 XPO4Q9C0E2 1151 aaKnown RBP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 RAB17Q9H0T7 212 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 THAP9Q9H5L6 903 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 DHX33Q9H6R0 707 aaKnown RBP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 SUDS3Q9H7L9 328 aaPredicted RBP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 ECT2Q9H8V3 914 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 WDR76Q9H967 626 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 ACTR8Q9H981 624 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 SIAEQ9HAT2 523 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 FOLH1BQ9HBA9 442 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 VAT1LQ9HCJ6 419 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 IL26Q9NPH9 171 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 YAE1D1Q9NRH1 226 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 CCL28Q9NRJ3 127 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 AGPAT5Q9NUQ2 364 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 AATFQ9NY61 560 aaKnown RBP eCLIP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 PCYOX1Q9UHG3 505 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 NOL7Q9UMY1 257 aaKnown RBP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 NPIPA1Q9UND3 350 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 FOXJ3Q9UPW0 622 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 MGAT4BQ9UQ53 548 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 CHMP2BQ9UQN3 213 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 TRAF3IP3Q9Y228 551 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 RASD1Q9Y272 281 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 MRPS33Q9Y291 106 aaKnown RBP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 RPL36Q9Y3U8 105 aaKnown RBP0.32□□□□□ -2.36
SGMS1-205ENST00000498514 SLC25A15Q9Y619 301 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 ABCC4O15439 1325 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 PCDH11XQ9BZA7 1347 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 FREM1Q5H8C1 2179 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 OTOFQ9HC10 1997 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 RGPD2P0DJD1 1756 aa0.32□□□□□ -2.36
SGMS1-205ENST00000498514 IQGAP3Q86VI3 1631 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 ALPK2Q86TB3 2170 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 IGHV3-66A0A0C4DH42 116 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 ZNF850A8MQ14 1090 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 TRDCB7Z8K6 153 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 F5H6K3 240 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 H3BNH8 94 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 C19orf84I3L1E1 186 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 DNASE2O00115 360 aaPredicted RBP0.31□□□□□ -2.36
SGMS1-205ENST00000498514 KIF2AO00139 706 aaPredicted RBP0.31□□□□□ -2.36
SGMS1-205ENST00000498514 DCTN6O00399 190 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 CTAGE5O15320 804 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 RS1O15537 224 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 ADAM12O43184 909 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 CXCL13O43927 109 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 UGT1A9O60656 530 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 VPS26AO75436 327 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 BCAS2O75934 225 aaPredicted RBP0.31□□□□□ -2.36
SGMS1-205ENST00000498514 MFN2O95140 757 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 SLC25A14O95258 325 aaPredicted RBP0.31□□□□□ -2.36
SGMS1-205ENST00000498514 TRIM16O95361 564 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 LGI1O95970 557 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 F10P00742 488 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 BGLAPP02818 100 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 IGF1P05019 195 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 IL4P05112 153 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 KRT7P08729 469 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 HSMCR30P0CW71 290 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 SMIM10L1P0DMW3 83 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 CALCBP10092 127 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 PGCP20142 388 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 TPSB2P20231 275 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 ATP6V1B2P21281 511 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 OMGP23515 440 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 CXCR2P25025 360 aa0.31□□□□□ -2.36
SGMS1-205ENST00000498514 HTR2AP28223 471 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms