RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 IL4P05112 153 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 CT62P0C5K7 136 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 ACSM4P0C7M7 580 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 MUC1P15941 1255 aaPredicted RBP1.92□□□□□ -2.1
PSPC1-205ENST00000497722 NAA10P41227 235 aaPredicted RBP1.92□□□□□ -2.1
PSPC1-205ENST00000497722 TMED10P49755 219 aaKnown RBP1.92□□□□□ -2.1
PSPC1-205ENST00000497722 PRMT2P55345 433 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 KRTAP10-10P60014 251 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 PITPNAQ00169 270 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 IRF4Q15306 451 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 SF3A2Q15428 464 aaKnown RBP1.92□□□□□ -2.1
PSPC1-205ENST00000497722 ORMDL2Q53FV1 153 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 XKR4Q5GH76 650 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 C9orf135Q5VTT2 229 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF880Q6PDB4 577 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 PLET1Q6UQ28 207 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 SHISA6Q6ZSJ9 500 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF615Q8N8J6 731 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF709Q8N972 641 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 KIFAP3Q92845 792 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 NT5C3BQ969T7 300 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 L3HYPDHQ96EM0 354 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 WFIKKN1Q96NZ8 548 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 CAMK2N2Q96S95 79 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 RPP21Q9H633 154 aaKnown RBP1.92□□□□□ -2.1
PSPC1-205ENST00000497722 HRASLS2Q9NWW9 162 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 PIKFYVEQ9Y2I7 2098 aa1.92□□□□□ -2.1
PSPC1-205ENST00000497722 MAPK8IP3Q9UPT6 1336 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 MYO10Q9HD67 2058 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 IGLV1-50A0A075B6I6 118 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 IGKV1D-17A0A075B6S4 117 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 TRAV19A0A0A6YYK7 116 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 A0A1W2PPE3 182 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 CST1P01037 141 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 IGKV1-17P01599 117 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 SERPINA5P05154 406 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 UQCRFS1P1P0C7P4 283 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 GGT1P19440 569 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 DCKP27707 260 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 CSNK1EP49674 416 aaKnown RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 P2RX1P51575 399 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 EIF3EP60228 445 aaKnown RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 STXBP1P61764 594 aaKnown RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 ESRRGP62508 458 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 IRX3P78415 501 aaPredicted RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 SYCNQ0VAF6 134 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF684Q5T5D7 378 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 AP1ARQ63HQ0 302 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 SLC8B1Q6J4K2 584 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 Q6ZR03 302 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 MRPL55Q7Z7F7 128 aaKnown RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 SLC22A9Q8IVM8 553 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 RGP1Q92546 391 aaPredicted RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 EEF1AKMT3Q96AZ1 226 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 ZNF578Q96N58 590 aaPredicted RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 TIMM17AQ99595 171 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 CHAC1Q9BUX1 264 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 SPNS1Q9H2V7 528 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 CWH43Q9H720 699 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 FGF20Q9NP95 211 aaPredicted RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 ENOPH1Q9UHY7 261 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 PITPNC1Q9UKF7 332 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 PSG8Q9UQ74 426 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 CSDC2Q9Y534 153 aaKnown RBP1.91□□□□□ -2.1
PSPC1-205ENST00000497722 ASB3Q9Y575 518 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 LRP4O75096 1905 aa1.91□□□□□ -2.1
PSPC1-205ENST00000497722 A0A1B0GVX0 72 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 LYRM9A8MSI8 78 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 C9JVG2 144 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 NUPL2O15504 423 aaKnown RBP1.9□□□□□ -2.11
PSPC1-205ENST00000497722 CLOCKO15516 846 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 RNF13O43567 381 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 FKBP6O75344 327 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 OR2J3O76001 311 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 RCBTB2O95199 551 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 IGLV3-19P01714 112 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF806P0C7X5 589 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 POLR2MP0CAP2 368 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 C1GALT1C1LP0DN25 315 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 OR5H8P0DN80 308 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 SSTR5P35346 364 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 TAGLN2P37802 199 aaKnown RBP1.9□□□□□ -2.11
PSPC1-205ENST00000497722 NSG1P42857 185 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 SLC1A1P43005 524 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 HCAR3P49019 387 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 CDKN2DP55273 166 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 MXD1Q05195 221 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 CDH17Q12864 832 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 QPRTQ15274 297 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 PSMD5Q16401 504 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 LY6EQ16553 131 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 MBOAT1Q6ZNC8 495 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 CENPQQ7L2Z9 268 aaPredicted RBP1.9□□□□□ -2.11
PSPC1-205ENST00000497722 NEGR1Q7Z3B1 354 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 HMGN2P46Q86SG4 172 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 TMEM150AQ86TG1 271 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 NOXO1Q8NFA2 376 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 OR9A2Q8NGT5 310 aa1.9□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF2Q9BSG1 426 aaPredicted RBP1.9□□□□□ -2.11
PSPC1-205ENST00000497722 FAM192AQ9GZU8 254 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms