RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 TMEM171Q8WVE6 324 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ZMYND19Q96E35 227 aaPredicted RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 MAN2C1Q9NTJ4 1040 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 CHST2Q9Y4C5 530 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 USP9YO00507 2555 aaPredicted RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ANKRD30BLA7E2S9 258 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 F5H5K5 113 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 RGS10O43665 173 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 PTP4A3O75365 173 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 OR2T7P0C7T2 308 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 KIR2DL2P43627 348 aaPredicted RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 UQCRFS1P47985 274 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 TIMM50Q3ZCQ8 353 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 RBM48Q5RL73 367 aaKnown RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 RGS7BPQ6MZT1 257 aaPredicted RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF676Q8N7Q3 588 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 OR2T27Q8NH04 317 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 HRASLS5Q96KN8 279 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 DMRTA2Q96SC8 542 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 GABARAPL3Q9BY60 117 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 ABCB9Q9NP78 766 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 TRIM36Q9NQ86 728 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 PCDHB16Q9NRJ7 776 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SLCO1C1Q9NYB5 712 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 RNF115Q9Y4L5 304 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 MYO7BQ6PIF6 2116 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 TVP23AA6NH52 213 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF716A6NP11 495 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 LOC110117498-PIK3R3F6TDL0 507 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 MITFO75030 526 aaPredicted RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 HRGP04196 525 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 HEXAP06865 529 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SPI1P17947 270 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 FIP1L1Q6UN15 594 aaKnown RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 STARD4Q96DR4 205 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 PIK3IP1Q96FE7 263 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 TMEM80Q96HE8 168 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 PRSS50Q9UI38 385 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 EFNA2O43921 213 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 PRSS23O95084 383 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 TNFAIP8O95379 198 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 FABP6P51161 128 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 PRKXP51817 358 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 PPP3R1P63098 170 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 RAB40BQ12829 278 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 ELFN2Q5R3F8 820 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 AGAP6Q5VW22 663 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 WDR88Q6ZMY6 472 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 HS3ST5Q8IZT8 346 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 NR1H4Q96RI1 486 aaPredicted RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SLC22A4Q9H015 551 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 CXorf56Q9H5V9 222 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 MOB1AQ9H8S9 216 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SLC17A5Q9NRA2 495 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 VSX1Q9NZR4 365 aaPredicted RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SLC7A11Q9UPY5 501 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 CCDC160A6NGH7 325 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SNAP29O95721 258 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 EPXP11678 715 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SNRPGP62308 76 aaKnown RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 H3F3AP84243 136 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 BCL2L15Q5TBC7 163 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 PAMR1Q6UXH9 720 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 OR51L1Q8NGJ5 315 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 TSEN15Q8WW01 171 aaKnown RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 FCGR1BQ92637 280 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 RORBQ92753 470 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 APOBEC3DQ96AK3 386 aaPredicted RBP7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SLCO4A1Q96BD0 722 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 CYSLTR2Q9NS75 346 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 SCOCQ9UIL1 159 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF391Q9UJN7 358 aa7.61□□□□□ -1.19
U2AF1-212ENST00000496462 DOCK10Q96BY6 2186 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 A0A087WXM4 84 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 ZAR1LA6NP61 321 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 FAM171A2A8MVW0 826 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 CDC42EP2O14613 210 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 XRCC2O43543 280 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 TIMM8AO60220 97 aaPredicted RBP7.6□□□□□ -1.19
U2AF1-212ENST00000496462 UPK3AO75631 287 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 HTR1FP30939 366 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 LIMS1P48059 325 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 PPP2R2BQ00005 443 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 OCLNQ16625 522 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 GFOD2Q3B7J2 385 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 FAM209AQ5JX71 171 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 C10orf128Q5T292 105 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 FAM27BQ5VT28 67 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 LRFN4Q6PJG9 635 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 VHLLQ6RSH7 139 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 SLC30A7Q8NEW0 376 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 OR11L1Q8NGX0 322 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 TMEM54Q969K7 222 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 ATF6BQ99941 703 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 POLE4Q9NR33 117 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 ASH2LQ9UBL3 628 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 GNG8Q9UK08 70 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 LRCH1Q9Y2L9 728 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 FAM215AQ9Y5M1 114 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms