RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	STX3	Q13277	289 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	TAF11	Q15544	211 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	SGCA	Q16586	387 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF74	Q16587	644 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	ZMAT1	Q5H9K5	638 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	MTX3	Q5HYI7	312 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF362	Q5T0B9	420 aa	Predicted RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	MBNL2	Q5VZF2	373 aa	Known RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	C9orf139	Q6ZV77	190 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	NANOGNB	Q7Z5D8	188 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	DPPA2	Q7Z7J5	298 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	RANBP3L	Q86VV4	465 aa	Predicted RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	LRRC28	Q86X40	367 aa	Predicted RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	KRT73	Q86Y46	540 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	KRTAP19-1	Q8IUB9	90 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	POU5F2	Q8N7G0	328 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF283	Q8N7M2	679 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	SMYD1	Q8NB12	490 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	UPRT	Q96BW1	309 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	MCHR1	Q99705	422 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	PAIP2	Q9BPZ3	127 aa	Known RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	PAIP1	Q9H074	479 aa	Known RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	RMND5A	Q9H871	391 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	NANOG	Q9H9S0	305 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	NANS	Q9NR45	359 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	CYSLTR2	Q9NS75	346 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	FAM53C	Q9NYF3	392 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	ZDHHC8	Q9ULC8	765 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.56	□□□□□ -1.36
NVL-223	ENST00000496393	UGT2A1	Q9Y4X1	527 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	RNF114	Q9Y508	228 aa		6.56	□□□□□ -1.36
NVL-223	ENST00000496393	IGKV1D-43	A0A0B4J1Z2	117 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393		G3V4G9	280 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	BLOC1S5-TXNDC5	H3BN57	136 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	BIRC5	O15392	142 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	TRMU	O75648	421 aa	Known RBP	6.55	□□□□□ -1.36
NVL-223	ENST00000496393	NDUFA7	O95182	113 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	CYB5R3	P00387	301 aa	Predicted RBP	6.55	□□□□□ -1.36
NVL-223	ENST00000496393	OPN1SW	P03999	348 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	ADH4	P08319	380 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	MELTF	P08582	738 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	IDO1	P14902	403 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	TNFSF4	P23510	183 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	ERF	P50548	548 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	POLR2J	P52435	117 aa	Known RBP	6.55	□□□□□ -1.36
NVL-223	ENST00000496393	FGF12	P61328	243 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	GNB2	P62879	340 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	PSG4	Q00888	419 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	PAX2	Q02962	417 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	CD47	Q08722	323 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	PSG7	Q13046	419 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	FADD	Q13158	208 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	CDK5R2	Q13319	367 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	SCARB2	Q14108	478 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	NPTX1	Q15818	432 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	TAF9	Q16594	264 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	FBLN7	Q53RD9	439 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	FAM201A	Q5SY85	155 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	HHAT	Q5VTY9	493 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	REEP3	Q6NUK4	255 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF774	Q6NX45	483 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	LRRN1	Q6UXK5	716 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393		Q6ZR03	302 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	KLB	Q86Z14	1044 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	MSRB3	Q8IXL7	192 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	VANGL1	Q8TAA9	524 aa	Predicted RBP	6.55	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF420	Q8TAQ5	688 aa	Predicted RBP	6.55	□□□□□ -1.36
NVL-223	ENST00000496393	ASB10	Q8WXI3	467 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	GTF2H4	Q92759	462 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	NABP1	Q96AH0	204 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	OR2V2	Q96R30	315 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	SPATA5L1	Q9BVQ7	753 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	CDADC1	Q9BWV3	514 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	SLC19A3	Q9BZV2	496 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	WNT5B	Q9H1J7	359 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	KCNN2	Q9H2S1	579 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	RAD21L1	Q9H4I0	556 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	TCF7L1	Q9HCS4	588 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	SLC25A37	Q9NYZ2	338 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	ASH2L	Q9UBL3	628 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.55	□□□□□ -1.36
NVL-223	ENST00000496393	HAO1	Q9UJM8	370 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	PPP1R3C	Q9UQK1	317 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393	LRCH1	Q9Y2L9	728 aa		6.55	□□□□□ -1.36
NVL-223	ENST00000496393		H0YL77	283 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	TMEM178B	H3BS89	294 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	HDAC3	O15379	428 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	PIN1P1	O15428	100 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	CHP2	O43745	196 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	GPR137B	O60478	399 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	ERLIN1	O75477	346 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	ABHD16A	O95870	558 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	THY1	P04216	161 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	HIST1H2AB	P04908	130 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	SFTPB	P07988	381 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	WNT2	P09544	360 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	H2AFB1	P0C5Y9	115 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	H2AFB2	P0C5Z0	115 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	ACADS	P16219	412 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms