RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 LHX9Q9NQ69 397 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 SHPKQ9UHJ6 478 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 KCNG2Q9UJ96 466 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 CDV3Q9UKY7 258 aaKnown RBP8.22□□□□□ -1.09
HPS4-217ENST00000496385 ZDHHC8Q9ULC8 765 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 ICAM5Q9UMF0 924 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 CSAG2Q9Y5P2 127 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 COL4A3Q01955 1670 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 C9JQL5 133 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 CDC42EP2O14613 210 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 CTAG2O75638 210 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 ZNF432O94892 652 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 PMP2P02689 132 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 CSRP1P21291 193 aaKnown RBP8.22□□□□□ -1.09
HPS4-217ENST00000496385 FCARP24071 287 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 MSX1P28360 303 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 LPAR6P43657 344 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 RPS10P46783 165 aaKnown RBP8.22□□□□□ -1.09
HPS4-217ENST00000496385 CLDN12P56749 244 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 BPIFB3P59826 476 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 FAM46CQ5VWP2 391 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 SLC22A25Q6T423 547 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 TPRG1Q6ZUI0 275 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 UBE3DQ7Z6J8 389 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 ETFBKMTQ8IXQ9 262 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 CDK20Q8IZL9 346 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 OR2L13Q8N349 312 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 RNASEH2CQ8TDP1 164 aaKnown RBP8.22□□□□□ -1.09
HPS4-217ENST00000496385 SECTM1Q8WVN6 248 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 SMARCD2Q92925 531 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 PRRT1Q99946 306 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 LGR4Q9BXB1 951 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 HDGFL3Q9Y3E1 203 aa8.22□□□□□ -1.09
HPS4-217ENST00000496385 CDC40O60508 579 aaKnown RBP eCLIP8.21□□□□□ -1.1
HPS4-217ENST00000496385 OR2C1O95371 312 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 SLC16A8O95907 504 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 NPPBP16860 134 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 TACR3P29371 465 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 AQP2P41181 271 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 AKR1C3P42330 323 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 TRA2BP62995 288 aaKnown RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 Q499Y3 187 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 SAPCD1Q5SSQ6 148 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 ARHGAP40Q5TG30 622 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 PRSS54Q6PEW0 395 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 NXPE4Q6UWF7 544 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 FRMD1Q8N878 549 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 AVL9Q8NBF6 648 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 CA5BP1Q8WTZ4 195 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 SLC22A18Q96BI1 424 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 CNN2Q99439 309 aaKnown RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 ZNF350Q9GZX5 532 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 SLC25A18Q9H1K4 315 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 FKRPQ9H9S5 495 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 SIRT7Q9NRC8 400 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 LAMP5Q9UJQ1 280 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 ZNF223Q9UK11 482 aaPredicted RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 PPIL1Q9Y3C6 166 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 GOLT1BQ9Y3E0 138 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 WNT6Q9Y6F9 365 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 NUP210Q8TEM1 1887 aaPredicted RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 A0A087WWC5 75 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 A0A0A6YYH2 397 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 A6NJ64 397 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 ZNF726A6NNF4 738 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 SAP18O00422 153 aaKnown RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 OR1F1O43749 312 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 DUS4LO95620 317 aaKnown RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 POU2F2P09086 479 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 ZNF735P0CB33 412 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 PET100P0DJ07 73 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 OR8G3PP0DMU2 310 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 IGFALSP35858 605 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 FXYD6P3P58550 94 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 RPS24P62847 133 aaKnown RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 JOSD1Q15040 202 aaPredicted RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 MOGAT2Q3SYC2 334 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 AMZ1Q400G9 498 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 ADGRF1Q5T601 910 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 UNQ6494/PRO21346Q6UXR6 183 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 PRSS35Q8N3Z0 413 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 ZNF417Q8TAU3 575 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 TMEM255BQ8WV15 326 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 PDCD1LG2Q9BQ51 273 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 RNF126Q9BV68 326 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 SGPP1Q9BX95 441 aa8.21□□□□□ -1.1
HPS4-217ENST00000496385 ACTR3CQ9C0K3 210 aaPredicted RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 ZCCHC3Q9NUD5 404 aaKnown RBP8.21□□□□□ -1.1
HPS4-217ENST00000496385 MYOFQ9NZM1 2061 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 A0A1B0GW64 132 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TSPAN11A1L157 253 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 M0QZK8 103 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 LEFTY2O00292 366 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
HPS4-217ENST00000496385 AMY2AP04746 511 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 GDI1P31150 447 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 SNCAP37840 140 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 NKX6-1P78426 367 aaPredicted RBP8.2□□□□□ -1.1
HPS4-217ENST00000496385 IL13RA1P78552 427 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TGM3Q08188 693 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms