RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 C4orf45Q96LM5 186 aa12□□□□□ -0.49
VARS-228ENST00000495010 SAMD8Q96LT4 415 aa12□□□□□ -0.49
VARS-228ENST00000495010 CCT8L2Q96SF2 557 aa12□□□□□ -0.49
VARS-228ENST00000495010 SEPHS2Q99611 448 aa12□□□□□ -0.49
VARS-228ENST00000495010 OR2H1Q9GZK4 316 aa12□□□□□ -0.49
VARS-228ENST00000495010 IKZF5Q9H5V7 419 aa12□□□□□ -0.49
VARS-228ENST00000495010 SMURF2Q9HAU4 748 aa12□□□□□ -0.49
VARS-228ENST00000495010 IL20RAQ9UHF4 553 aa12□□□□□ -0.49
VARS-228ENST00000495010 PPP1R3CQ9UQK1 317 aa12□□□□□ -0.49
VARS-228ENST00000495010 TIMM10BQ9Y5J6 103 aa12□□□□□ -0.49
VARS-228ENST00000495010 GMEB1Q9Y692 573 aa12□□□□□ -0.49
VARS-228ENST00000495010 TANC2Q9HCD6 1990 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 LYPD3O95274 346 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 NGFP01138 241 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 MT-ND1P03886 318 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 IGHV4-38-2P0DP08 117 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 AQP2P41181 271 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 MRPL19P49406 292 aaKnown RBP11.99□□□□□ -0.49
VARS-228ENST00000495010 PAX8Q06710 450 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 FMODQ06828 376 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 HNRNPA0Q13151 305 aaKnown RBP11.99□□□□□ -0.49
VARS-228ENST00000495010 ZMYND11Q15326 602 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 ZNF362Q5T0B9 420 aaPredicted RBP11.99□□□□□ -0.49
VARS-228ENST00000495010 FAM27BQ5VT28 67 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 FUNDC1Q8IVP5 155 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 ZNF283Q8N7M2 679 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 NABP1Q96AH0 204 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 THOC1Q96FV9 657 aaKnown RBP11.99□□□□□ -0.49
VARS-228ENST00000495010 RBP7Q96R05 134 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 BEX1Q9HBH7 125 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 MAN2C1Q9NTJ4 1040 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 LRCH1Q9Y2L9 728 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 UGT2A1Q9Y4X1 527 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 MMP24Q9Y5R2 645 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 TGP01266 2768 aa11.99□□□□□ -0.49
VARS-228ENST00000495010 TRBV5-3A0A0A0MS03 114 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 M0QZ24 198 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 OR7A10O76100 309 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 ABHD16AO95870 558 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 CST2P09228 141 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 PPIAL4GP0DN37 164 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 LAP3P28838 519 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 CD80P33681 288 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 PCBP3P57721 371 aaKnown RBP11.98□□□□□ -0.49
VARS-228ENST00000495010 PSG7Q13046 419 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 OCLNQ16625 522 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 AGKQ53H12 422 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 ZNF774Q6NX45 483 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 C9orf139Q6ZV77 190 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 PATL1Q86TB9 770 aaKnown RBP11.98□□□□□ -0.49
VARS-228ENST00000495010 SLC30A8Q8IWU4 369 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 NPEPL1Q8NDH3 523 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 GPR32P1Q8NGA4 272 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 OR4F5Q8NH21 305 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 HDAC2Q92769 488 aaKnown RBP11.98□□□□□ -0.49
VARS-228ENST00000495010 SGTBQ96EQ0 304 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 ZNF426Q9BUY5 554 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 SSBP3Q9BWW4 388 aaPredicted RBP11.98□□□□□ -0.49
VARS-228ENST00000495010 WNT5BQ9H1J7 359 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 MEPEQ9NQ76 525 aaPredicted RBP11.98□□□□□ -0.49
VARS-228ENST00000495010 TNFRSF19Q9NS68 423 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 IL19Q9UHD0 177 aa11.98□□□□□ -0.49
VARS-228ENST00000495010 NDRG4Q9ULP0 352 aaKnown RBP11.98□□□□□ -0.49
VARS-228ENST00000495010 TRAV40A0A0B4J280 105 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 A0A1W2PPL8 197 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 CEACAM18A8MTB9 384 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 F5H0A9 414 aaPredicted RBP11.97□□□□□ -0.49
VARS-228ENST00000495010 HOXA3O43365 443 aaPredicted RBP11.97□□□□□ -0.49
VARS-228ENST00000495010 ICMTO60725 284 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 RPS2P15880 293 aaKnown RBP11.97□□□□□ -0.49
VARS-228ENST00000495010 TUBG1P23258 451 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 CPT2P23786 658 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 TAS2R41P59536 307 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 GNB2P62879 340 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 TOP3AQ13472 1001 aaPredicted RBP11.97□□□□□ -0.49
VARS-228ENST00000495010 RUNDC3AQ59EK9 446 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 ARMC4Q5T2S8 1044 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 BRICD5Q6PL45 260 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 PTOV1Q86YD1 416 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 KIR3DL3Q8N743 410 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 OR4D11Q8NGI4 311 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 MOSPD2Q8NHP6 518 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 PFN4Q8NHR9 129 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 FNDC8Q8TC99 324 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 ITLN1Q8WWA0 313 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 RASSF5Q8WWW0 418 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 PLEKHA8Q96JA3 519 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 MAGEB18Q96M61 343 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 CPPED1Q9BRF8 314 aaPredicted RBP11.97□□□□□ -0.49
VARS-228ENST00000495010 TXNIPQ9H3M7 391 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 TUBG2Q9NRH3 451 aa11.97□□□□□ -0.49
VARS-228ENST00000495010 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.97□□□□□ -0.49
VARS-228ENST00000495010 V9GYY5 206 aaPredicted RBP11.97□□□□□ -0.49
VARS-228ENST00000495010 IGKV1D-43A0A0B4J1Z2 117 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 FAM181BA6NEQ2 426 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 C12orf71A8MTZ7 269 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 IFNL4K9M1U5 179 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 TIMM23O14925 209 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 WNT2P09544 360 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 RBMXP38159 391 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms