RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SCRG1O75711 98 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 UTS2O95399 124 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 CALCBP10092 127 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 ACHEP22303 614 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 CDC34P49427 236 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 PLXDC2Q6UX71 529 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 ARHGEF39Q8N4T4 335 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 CMBLQ96DG6 245 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 CXorf58Q96LI9 332 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF2Q9BSG1 426 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 LRFN3Q9BTN0 628 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 GSX2Q9BZM3 304 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF768Q9H5H4 540 aaKnown RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 AAMDCQ9H7C9 122 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 LMAN1LQ9HAT1 526 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 NDRG3Q9UGV2 375 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 TRDV1A0A1B0GX56 115 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF716A6NP11 495 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 SIGLEC6O43699 453 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 FOXK2Q01167 660 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 IL10RAQ13651 578 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 AMIGO3Q86WK7 504 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 EIF4E3Q8N5X7 224 aaKnown RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 OR5AP2Q8NGF4 316 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 BCL2L2Q92843 193 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 A0A1B0GVG6 124 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 F5H697 171 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 AIFM1O95831 613 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 SOD1P00441 154 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 HIST1H3AP68431 136 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 PRAMEF20Q5VT98 475 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 GPRIN1Q7Z2K8 1008 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 LSRQ86X29 649 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 RTP4Q96DX8 246 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 OR2A14Q96R47 310 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 NDRG4Q9ULP0 352 aaKnown RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 SLC17A4Q9Y2C5 497 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 C1QBP02746 253 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 SCGB1A1P11684 91 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 RPL12P30050 165 aaKnown RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 RGRP47804 291 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 PPOXP50336 477 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 RPL24P83731 157 aaKnown RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 PAX5Q02548 391 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 TEKQ02763 1124 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 AGBL4Q5VU57 503 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 B3GNTL1Q67FW5 361 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-221ENST00000493795 TBPL2Q6SJ96 375 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 DCXRQ7Z4W1 244 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 CLEC14AQ86T13 490 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 ZADH2Q8N4Q0 377 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 MOB3AQ96BX8 217 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 DCBLD2Q96PD2 775 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 TMEM231Q9H6L2 316 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 SIAEQ9HAT2 523 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 ASIC5Q9NY37 505 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 NID2Q14112 1375 aa7.23□□□□□ -1.25
BRCA1-221ENST00000493795 M0R143 59 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TOX3O15405 576 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ALX3O95076 343 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TTRP02766 147 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 IAPPP10997 89 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 FPR3P25089 353 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 PTGER1P34995 402 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 PCBP4P57723 403 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 GPR85P60893 370 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ERV3-1Q14264 604 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 LEXMQ3ZCV2 418 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TMEM268Q5VZI3 342 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 CYHR1Q6ZMK1 362 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 LHFPL2Q6ZUX7 228 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 OR52N1Q8NH53 320 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 GOT1L1Q8NHS2 421 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 NRG4Q8WWG1 115 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 SLC35B4Q969S0 331 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ZC3HAV1LQ96H79 300 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 C12orf49Q9H741 205 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 LANCL2Q9NS86 450 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 BET1LQ9NYM9 111 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 GPR45Q9Y5Y3 372 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ALOX5APP20292 161 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 RPS19P39019 145 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 RBP2P50120 134 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 HERVK_113P61574 105 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TPBGQ13641 420 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 SMN1Q16637 294 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TIPARPQ7Z3E1 657 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 OR52I1Q8NGK6 324 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 OR4A4PQ8NGN8 299 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 OR1J1Q8NGS3 322 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TMED6Q8WW62 240 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 RPL3LQ92901 407 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 FAAP24Q9BTP7 215 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 HCRTR1O43613 425 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 CD37P11049 281 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 DCDP81605 110 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 LBHQ53QV2 105 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 MFSD4AQ8N468 514 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 SLC38A9Q8NBW4 561 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 AGBL5Q8NDL9 886 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms