RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ENPP4Q9Y6X5 453 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 DAPL1A0PJW8 107 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF724A8MTY0 619 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TRDCB7Z8K6 153 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FCMRO60667 390 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 HPRT1P00492 218 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 HLA-AP01891 365 aaKnown RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 OR5G3P0C626 314 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 F3P13726 295 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 LPOP22079 712 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 HSD11B1P28845 292 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 RAP1BP61224 184 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 PITX1P78337 314 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CDC42EP1Q00587 391 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ACSM3Q53FZ2 586 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 LCTLQ6UWM7 567 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 WFDC8Q8IUA0 241 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 NKAPQ8N5F7 415 aaKnown RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SLC30A7Q8NEW0 376 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SFXN5Q8TD22 340 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 DVL3Q92997 716 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SLC35E1Q96K37 410 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SLC6A7Q99884 636 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CCDC3Q9BQI4 270 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 PBDC1Q9BVG4 233 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FNDC11Q9BVV2 318 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CNTNAP3Q9BZ76 1288 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF552Q9H707 407 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TREX1Q9NSU2 369 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 RNF150Q9ULK6 438 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SNX10Q9Y5X0 201 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FAM72CH0Y354 149 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 J3QLW9 94 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 M0QZQ0 153 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CXCL1P09341 107 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF19P17023 458 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 GABRR1P24046 479 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TAS2R41P59536 307 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FAM72AQ5TYM5 149 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FAM72DQ6L9T8 149 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SMARCD3Q6STE5 483 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TOMM20LQ6UXN7 152 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TMPPEQ6ZT21 453 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SLC35D2Q76EJ3 337 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FAM72BQ86X60 149 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 NPWQ8N729 165 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 OR4C16Q8NGL9 310 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 OR2L2Q8NH16 312 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 Q8WTZ3 238 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 MCHR2Q969V1 340 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ZBTB8AQ96BR9 441 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SAT2Q96F10 170 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CIB3Q96Q77 187 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 LYSMD1Q96S90 227 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ULBP1Q9BZM6 244 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ACTR3CQ9C0K3 210 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 MTIF3Q9H2K0 278 aaKnown RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FBRSQ9HAH7 460 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CHST11Q9NPF2 352 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 HCFC1R1Q9NWW0 138 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FKBP11Q9NYL4 201 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 PAM16Q9Y3D7 125 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 A0A087WUJ7 227 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 YJEFN3A6XGL0 299 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 SERPINE3A8MV23 424 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 GSTZ1O43708 216 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 KLF8O95600 359 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 IL18BPO95998 194 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PPBPP02775 128 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 C1SP09871 688 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 GZMHP20718 246 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 DPP4P27487 766 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 CAMLGP49069 296 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ERVFRD-1P60508 538 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 MRPS6P82932 125 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF763Q0D2J5 394 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 UBE2NLQ5JXB2 153 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 AGBL4Q5VU57 503 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 C1orf122Q6ZSJ8 110 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TMCO2Q7Z6W1 182 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TOP6BLQ8N6T0 577 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 EXD3Q8N9H8 876 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ST6GALNAC3Q8NDV1 305 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 WFDC12Q8WWY7 111 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 MRGPRX1Q96LB2 322 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PAAF1Q9BRP4 392 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 OR8D2Q9GZM6 311 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 OR51I1Q9H343 314 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 KLK14Q9P0G3 267 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 HSF4Q9ULV5 492 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 FOXJ3Q9UPW0 622 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 SH2B3Q9UQQ2 575 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 C14orf166Q9Y224 244 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 FLVCR1Q9Y5Y0 555 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 CKAP5Q14008 2032 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TRAV34A0A0B4J273 112 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 XKRY2A2RUG3 117 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 CPSF4LA6NMK7 179 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 IQCF5A8MTL0 148 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 XKRYO14609 159 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms