RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 NRSN2Q9GZP1 204 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 PRR13Q9NZ81 148 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 KCNG2Q9UJ96 466 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 INSL5Q9Y5Q6 135 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 TICRRQ7Z2Z1 1910 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 IFITM10A6NMD0 228 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 C2orf74A8MZ97 194 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 PRAMEF26H0Y7S4 382 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 FLT3LGP49771 235 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 SSBP1Q04837 148 aaKnown RBP10.57□□□□□ -0.72
HDAC4-210ENST00000493582 PAPD4Q6PIY7 484 aaKnown RBP10.57□□□□□ -0.72
HDAC4-210ENST00000493582 FAM174AQ8TBP5 190 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 TEX101Q9BY14 249 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 NMNAT2Q9BZQ4 307 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 COMMD4Q9H0A8 199 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 OR5AC2Q9NZP5 309 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 GTF2A1LQ9UNN4 478 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 CXorf65A6NEN9 183 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 ABHD16AO95870 558 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 GPANK1O95872 356 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 OR8U9P0C7N5 309 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 MAOAP21397 527 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 RPS4Y1P22090 263 aaKnown RBP10.57□□□□□ -0.72
HDAC4-210ENST00000493582 ITGA3P26006 1051 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 LSSP48449 732 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 SCAND1P57086 179 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 UNQ6494/PRO21346Q6UXR6 183 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.57□□□□□ -0.72
HDAC4-210ENST00000493582 FRMD1Q8N878 549 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 OR8U1Q8NH10 309 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 MCHR2Q969V1 340 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 MRGPRX3Q96LB0 322 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 CGGBP1Q9UFW8 167 aaPredicted RBP10.57□□□□□ -0.72
HDAC4-210ENST00000493582 WIF1Q9Y5W5 379 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 A0A1W2PPE2 198 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 H7C1C5 153 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 SLC17A2O00624 439 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 P2RX6O15547 441 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 IL2RAP01589 272 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 HOXC4P09017 264 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-210ENST00000493582 EMDP50402 254 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 LCN6P62502 163 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 PNLIPRP3Q17RR3 467 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 RNASE10Q5GAN6 216 aaKnown RBP10.56□□□□□ -0.72
HDAC4-210ENST00000493582 GLYATL3Q5SZD4 288 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 RPL7L1Q6DKI1 246 aaKnown RBP10.56□□□□□ -0.72
HDAC4-210ENST00000493582 ASPHD2Q6ICH7 369 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 DPY19L4Q7Z388 723 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF595Q8IYB9 648 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF563Q8TA94 476 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF775Q96BV0 537 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-210ENST00000493582 SAT2Q96F10 170 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF426Q9BUY5 554 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 SLC46A2Q9BY10 475 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 TET1Q8NFU7 2136 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 URADA6NGE7 173 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 BLOC1S5-TXNDC5H3BN57 136 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 EFSO43281 561 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 LDB3O75112 727 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 ADAP1O75689 374 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 FGF19O95750 216 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 CTGFP29279 349 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 DVL1P1P54792 670 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-210ENST00000493582 EBPQ15125 230 aaKnown RBP10.56□□□□□ -0.72
HDAC4-210ENST00000493582 SLC35D3Q5M8T2 416 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 LRRC69Q6ZNQ3 347 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 MTSS1LQ765P7 747 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 STX12Q86Y82 276 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF584Q8IVC4 421 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 SLC41A2Q96JW4 573 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 TAAR9Q96RI9 348 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 RAB33BQ9H082 229 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 TMEM74BQ9NUR3 256 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 LAMP5Q9UJQ1 280 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 VCANP13611 3396 aa10.56□□□□□ -0.72
HDAC4-210ENST00000493582 DCDC2BA2VCK2 349 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 STK17BO94768 372 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 IFNA2P01563 188 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 GABRA3P34903 492 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 RAB5CP51148 216 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 EXOSC7Q15024 291 aaKnown RBP10.55□□□□□ -0.72
HDAC4-210ENST00000493582 NPAS4Q8IUM7 802 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 RELTQ969Z4 430 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 INSM2Q96T92 566 aaPredicted RBP10.55□□□□□ -0.72
HDAC4-210ENST00000493582 SLC17A9Q9BYT1 436 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 RGCCQ9H4X1 137 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 TRBV6-7A0A0A0MS04 114 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 H7C1Q1 480 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 EIF1AYO14602 144 aaKnown RBP10.55□□□□□ -0.72
HDAC4-210ENST00000493582 ACAA2P42765 397 aaKnown RBP10.55□□□□□ -0.72
HDAC4-210ENST00000493582 EIF1AXP47813 144 aaKnown RBP10.55□□□□□ -0.72
HDAC4-210ENST00000493582 SLC7A9P82251 487 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 PMPCAQ10713 525 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 TAF1CQ15572 869 aaPredicted RBP10.55□□□□□ -0.72
HDAC4-210ENST00000493582 MLF2Q15773 248 aaPredicted RBP10.55□□□□□ -0.72
HDAC4-210ENST00000493582 TCTN1Q2MV58 587 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 METRNLQ641Q3 311 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 BTNL8Q6UX41 500 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms