RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TAS2R16Q9NYV7 291 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 ST6GALNAC2Q9UJ37 374 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 POLR1DQ9Y2S0 133 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 UGT2A1Q9Y4X1 527 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 SLC1A7O00341 560 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 XPNPEP2O43895 674 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 SELENOFO60613 162 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 RAD51DO75771 328 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 APOL3O95236 402 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 FARS2O95363 451 aaKnown RBP11.75□□□□□ -0.53
MSH6-208ENST00000493177 RAF1P04049 648 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 GAAP10253 952 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 NPR2P20594 1047 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 MSR1P21757 451 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 IL32P24001 234 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 NAA10P41227 235 aaPredicted RBP11.75□□□□□ -0.53
MSH6-208ENST00000493177 CAPZA2P47755 286 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 SH3BGRP55822 239 aaPredicted RBP11.75□□□□□ -0.53
MSH6-208ENST00000493177 ADAM8P78325 824 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 HSF2Q03933 536 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 TSC22D1Q15714 1073 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 LINC01590Q5TEZ4 76 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 LAIR2Q6ISS4 152 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 ALKBH2Q6NS38 261 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 SHFQ7M4L6 423 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 GABRG1Q8N1C3 465 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 OR1K1Q8NGR3 316 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 OR6N2Q8NGY6 317 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 KISS1RQ969F8 398 aaPredicted RBP11.75□□□□□ -0.53
MSH6-208ENST00000493177 INTS14Q96SY0 518 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 CDADC1Q9BWV3 514 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 KCNN2Q9H2S1 579 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 NELFAQ9H3P2 528 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 LIME1Q9H400 295 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 TPRKBQ9Y3C4 175 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 ITPR2Q14571 2701 aa11.75□□□□□ -0.53
MSH6-208ENST00000493177 FAM221AA4D161 298 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 TFP02787 698 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 HRGP04196 525 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 SCG5P05408 212 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 SPARCP09486 303 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 OR8G3PP0DMU2 310 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 PPP3CBP16298 524 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 HOXC12P31275 282 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 ENTPD1P49961 510 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 CXCR4P61073 352 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 CSNK2BP67870 215 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 MRPS34P82930 218 aaKnown RBP11.74□□□□□ -0.53
MSH6-208ENST00000493177 POU4F2Q12837 409 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 P2RY6Q15077 328 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 KLHL22Q53GT1 634 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 RBM48Q5RL73 367 aaKnown RBP11.74□□□□□ -0.53
MSH6-208ENST00000493177 ANKRD16Q6P6B7 361 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 UGT2A3Q6UWM9 527 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 PAMR1Q6UXH9 720 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 FOXL2NBQ6ZUU3 175 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 BHLHA15Q7RTS1 189 aaPredicted RBP11.74□□□□□ -0.53
MSH6-208ENST00000493177 SLC22A24Q8N4F4 322 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 ZNF433Q8N7K0 673 aaPredicted RBP11.74□□□□□ -0.53
MSH6-208ENST00000493177 ZNF540Q8NDQ6 660 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 SLC26A10Q8NG04 563 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 LGALS12Q96DT0 336 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 SH3GL3Q99963 347 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 WDR76Q9H967 626 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 SIAEQ9HAT2 523 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 MRPL22Q9NWU5 206 aaKnown RBP11.74□□□□□ -0.53
MSH6-208ENST00000493177 HAO2Q9NYQ3 351 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 BLOC1S6Q9UL45 172 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 COMMD3-BMI1R4GMX3 469 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 FREM1Q5H8C1 2179 aa11.74□□□□□ -0.53
MSH6-208ENST00000493177 CENPEQ02224 2701 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 IRGMA1A4Y4 181 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 EFCAB10A6NFE3 127 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 PTGES3LE9PB15 166 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 ZNF593O00488 134 aaPredicted RBP11.73□□□□□ -0.53
MSH6-208ENST00000493177 TMCC2O75069 709 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 SBK2P0C263 348 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 COX5AP20674 150 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 CRYGSP22914 178 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 EEF1B2P24534 225 aaKnown RBP11.73□□□□□ -0.53
MSH6-208ENST00000493177 CCKARP32238 428 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 UBE2NP61088 152 aaKnown RBP11.73□□□□□ -0.53
MSH6-208ENST00000493177 GGTLC2Q14390 218 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 HIKESHIQ53FT3 197 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 SFRP5Q5T4F7 317 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 AHSA2Q719I0 299 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 SLC16A14Q7RTX9 510 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 SLC16A9Q7RTY1 509 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 WFDC8Q8IUA0 241 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 LINC00346Q8IVM7 164 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 SLC35F2Q8IXU6 374 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 TIGD4Q8IY51 512 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 STX19Q8N4C7 294 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 OR10H4Q8NGA5 316 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 OR2AJ1Q8NGZ0 328 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 SMAP2Q8WU79 429 aaPredicted RBP11.73□□□□□ -0.53
MSH6-208ENST00000493177 GGHQ92820 318 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 NABP1Q96AH0 204 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms