RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 DOK1Q99704 481 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 MDFIQ99750 246 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 ULBP2Q9BZM5 246 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 RIBC2Q9H4K1 309 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF442Q9H7R0 627 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 B3GAT2Q9NPZ5 323 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 IL20Q9NYY1 176 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 NKX1-2Q9UD57 310 aaPredicted RBP10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF346Q9UL40 294 aaKnown RBP10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 ADAM18Q9Y3Q7 739 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 PMF1-BGLAPU3KQ54 211 aa10.96□□□□□ -0.65
SEC61A1-206ENST00000491668 TEX13CA0A0J9YWL9 993 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 A6NIZ1 184 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 NPIPB13A6NJU9 1138 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 B9A039 149 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 NPIPB4C9JG80 1138 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 SOCS2O14508 198 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 MITFO75030 526 aaPredicted RBP10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 ATP6V1G2O95670 118 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 IGHG1P01857 330 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 PGA4P0DJD7 388 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 PGA3P0DJD8 388 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 ZNF35P13682 527 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 PEX2P28328 305 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 CAPZA2P47755 286 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 CSNK1A1P48729 337 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 FXYD6P3P58550 94 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 RAP1BP61224 184 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 SNRPD2P62316 118 aaKnown RBP10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 ESRRGP62508 458 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 RAP1AP62834 184 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 FHL1Q13642 323 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 HIST3H3Q16695 136 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 TMEM249Q2WGJ8 235 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 FAM205BPQ63HN1 556 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC27A4Q6P1M0 643 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 JAZF1Q86VZ6 243 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 PARP8Q8N3A8 854 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 FAM168AQ92567 244 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC25A44Q96H78 314 aaPredicted RBP10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 Q96M85 177 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 FOXB1Q99853 325 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 KCNS3Q9BQ31 491 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 MRPL13Q9BYD1 178 aaKnown RBP10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 VCX3BQ9H321 246 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 MOV10Q9HCE1 1003 aaKnown RBP10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 C8orf4Q9NR00 106 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 GLTPQ9NZD2 209 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 REV1Q9UBZ9 1251 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 BAIAP2Q9UQB8 552 aa10.95□□□□□ -0.66
SEC61A1-206ENST00000491668 TLX2O43763 284 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 IDH3BO43837 385 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 IGHMP01871 453 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 ALPLP05186 524 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 CD79AP11912 226 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 BMP4P12644 408 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 NR2C1P13056 603 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 ACADSP16219 412 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 ZNF26P17031 533 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 NPR2P20594 1047 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 NR4A1P22736 598 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 SDHAP31040 664 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 GIPRP48546 466 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 CRISP1P54107 249 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 MYBPC1Q00872 1141 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 CD47Q08722 323 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 KRR1Q13601 381 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 GSG1Q2KHT4 349 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC35F1Q5T1Q4 408 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 KRT80Q6KB66 452 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 ARIH2OSQ8N7S6 290 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 LRRC75AQ8NAA5 344 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 SYT14Q8NB59 555 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 OR8D4Q8NGM9 314 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 ASB10Q8WXI3 467 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 RASD2Q96D21 266 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 NMD3Q96D46 503 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 PLEKHA8Q96JA3 519 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 TSPAN32Q96QS1 320 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 GPX7Q96SL4 187 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 PRRG3Q9BZD7 231 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 PLA2G12AQ9BZM1 189 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 NRIP3Q9NQ35 241 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 YAE1D1Q9NRH1 226 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 TMEM38BQ9NVV0 291 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 USE1Q9NZ43 259 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 TMEFF2Q9UIK5 374 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 MALRD1Q5VYJ5 2156 aa10.94□□□□□ -0.66
SEC61A1-206ENST00000491668 RIIAD1A6NNX1 92 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 IMPA2O14732 288 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 CASQ2O14958 399 aaPredicted RBP10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 RENP00797 406 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 IFNGP01579 166 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 APEHP13798 732 aaKnown RBP10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC25A16P16260 332 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 PTDSS1P48651 473 aaKnown RBP10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 PPOXP50336 477 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 RAB1AP62820 205 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 SNTB2Q13425 540 aaKnown RBP10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 GINS1Q14691 196 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms