RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	GSTM3	P21266	225 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TUBG1	P23258	451 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	FGF12	P61328	243 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TAF11	Q15544	211 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	SGCA	Q16586	387 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	KPRP	Q5T749	579 aa	Predicted RBP	16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	REEP3	Q6NUK4	255 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	LINC00114	Q6XXX2	140 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	VANGL1	Q8TAA9	524 aa	Predicted RBP	16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NEIL1	Q96FI4	390 aa	Predicted RBP	16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TUBG2	Q9NRH3	451 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	LGALS13	Q9UHV8	139 aa		16.07	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334		A0A1W2PRG6	482 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	MCIDAS	D6RGH6	385 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TNFRSF13B	O14836	293 aa	Predicted RBP	16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	GPR137B	O60478	399 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TPST2	O60704	377 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	IDO1	P14902	403 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	CDA	P32320	146 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	FAM189A2	Q15884	450 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	C10orf128	Q5T292	105 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ZNF613	Q6PF04	617 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NLRC3	Q7RTR2	1065 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	HDDC2	Q7Z4H3	204 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PTOV1	Q86YD1	416 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	FITM2	Q8N6M3	262 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NOXO1	Q8NFA2	376 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	OR8B3	Q8NGG8	313 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NFKBID	Q8NI38	313 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	OR8B2	Q96RD0	313 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	SLCO1B3	Q9NPD5	702 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PNPO	Q9NVS9	261 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ZNF229	Q9UJW7	825 aa		16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	KMT2C	Q8NEZ4	4911 aa	Known RBP	16.06	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	SDHD	O14521	159 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	FMO6P	O60774	539 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PRB2	P02812	416 aa	Predicted RBP	16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ACADS	P16219	412 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ZNF133	P52736	654 aa	Predicted RBP	16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ERVK-25	P63136	954 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	FAM27B	Q5VT28	67 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TTC33	Q6PID6	262 aa	Predicted RBP	16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334		Q6ZR03	302 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	OR2V2	Q96R30	315 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ZNF607	Q96SK3	696 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	SEPHS2	Q99611	448 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	OR2H1	Q9GZK4	316 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	GCM1	Q9NP62	436 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TIMM10B	Q9Y5J6	103 aa		16.05	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	BLOC1S5-TXNDC5	H3BN57	136 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	CHP2	O43745	196 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PIP5K1C	O60331	668 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	SERPINB7	O75635	380 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TRMU	O75648	421 aa	Known RBP	16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	THRB	P10828	461 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	UMPS	P11172	480 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	KITLG	P21583	273 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PITPNB	P48739	271 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	CDK6	Q00534	326 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	IFFO1	Q0D2I5	559 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	RUSC1-AS1	Q66K80	236 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NPEPL1	Q8NDH3	523 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	MCHR1	Q99705	422 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PCGF1	Q9BSM1	259 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TRIM15	Q9C019	465 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	WNT5B	Q9H1J7	359 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	SMURF2	Q9HAU4	748 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	STX18	Q9P2W9	335 aa	Known RBP	16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	CLN8	Q9UBY8	286 aa		16.04	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	P2RY10	O00398	339 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ZNF205	O95201	554 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	FSTL3	O95633	263 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ASAH2B	P0C7U1	165 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	EPHA3	P29320	983 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	GUCA1A	P43080	201 aa	Predicted RBP	16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	DAP3	P51398	398 aa	Known RBP	16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	MMP16	P51512	607 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	LOXL3	P58215	753 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PCBD1	P61457	104 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	STX3	Q13277	289 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	GCNT6	Q5T4J0	391 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	SAMD5	Q5TGI4	173 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	GDPGP1	Q6ZNW5	385 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	VASH1	Q7L8A9	365 aa	Predicted RBP	16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NANOGNB	Q7Z5D8	188 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ATG16L2	Q8NAA4	619 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	MRAP	Q8TCY5	172 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	GATAD2B	Q8WXI9	593 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NABP1	Q96AH0	204 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	CMBL	Q96DG6	245 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	WFDC6	Q9BQY6	131 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TMEM246	Q9BRR3	403 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ROPN1B	Q9BZX4	212 aa	Predicted RBP	16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PAIP1	Q9H074	479 aa	Known RBP	16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	C16orf95	Q9H693	158 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	WDR55	Q9H6Y2	383 aa	Predicted RBP	16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ROPN1	Q9HAT0	212 aa	Predicted RBP	16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ACOXL	Q9NUZ1	547 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ZIM2	Q9NZV7	527 aa		16.03	■□□□□ 0.16

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms