RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 IGFN1Q86VF2 1251 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 GLCCI1Q86VQ1 547 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 LRP11Q86VZ4 500 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 WDFY1Q8IWB7 410 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 DHRS1Q96LJ7 313 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 DIRC2Q96SL1 478 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 NDUFAF4Q9P032 175 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 ACTR3BQ9P1U1 418 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 TMEFF2Q9UIK5 374 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 PRPF19Q9UMS4 504 aaKnown RBP14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 GRIP1Q9Y3R0 1128 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 IGLV3-9A0A075B6K5 115 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 LRP5LA4QPB2 252 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 H3BSA7 217 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 J3KTA2 159 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 NCK1P16333 377 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 LAP3P28838 519 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 GPR4P46093 362 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 ZNF81P51508 661 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 ERVK-25P63136 954 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 FMODQ06828 376 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 ALKBH6Q3KRA9 238 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 OR13C2Q8NGS9 318 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 RAB1CQ92928 201 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 ELMOD3Q96FG2 381 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 C7orf34Q96L11 122 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 SAP30LQ9HAJ7 183 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 TMCC3Q9ULS5 477 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 ZNF469Q96JG9 3925 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 ABCA1O95477 2261 aa14.2□□□□□ -0.14
PDLIM2-217ENST00000491330 B2RBV5 119 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 ARPC2O15144 300 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 LILRA1O75019 489 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 IGHV3-13P01766 116 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 HPXP02790 462 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 TNFSF4P23510 183 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 CCL8P80075 99 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 PSG4Q00888 419 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 CR1LQ2VPA4 569 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 PGM2L1Q6PCE3 622 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 SHQ1Q6PI26 577 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 ADCK1Q86TW2 530 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 LINC00471Q8N535 108 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 NPEPL1Q8NDH3 523 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 ABHD4Q8TB40 342 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 SLC7A13Q8TCU3 470 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 RAB39BQ96DA2 213 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 POM121L2Q96KW2 1035 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 TSPAN32Q96QS1 320 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 MDFIQ99750 246 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 OR2H1Q9GZK4 316 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 RERGLQ9H628 205 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 IL1RAPQ9NPH3 570 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 GMPR2Q9P2T1 348 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 POLR1DQ9Y2S0 133 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 UGT2A1Q9Y4X1 527 aa14.19□□□□□ -0.14
PDLIM2-217ENST00000491330 IGHV1-69-2A0A0G2JMI3 117 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 PRSS37A4D1T9 235 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 CLDN25C9JDP6 229 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 LYNX1G3V0Z9 82 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 KHDRBS3O75525 346 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 KRT36O76013 467 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 ABHD16AO95870 558 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 CLPTM1O96005 669 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 SEMG1P04279 462 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 LYNX1P0DP58 116 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 COX5BP10606 129 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 IGFBP5P24593 272 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 CRABP1P29762 137 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 SDHAP31040 664 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 CRYBB2P43320 205 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 DVL1P1P54792 670 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 PPP1CBP62140 327 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 GK3PQ14409 553 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 ELFN2Q5R3F8 820 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 DPY19L2P2Q6ZN68 376 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 AKR7LQ8NHP1 331 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 IPCEF1Q8WWN9 437 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 NABP1Q96AH0 204 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 NMD3Q96D46 503 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 FAM46AQ96IP4 442 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 C4orf45Q96LM5 186 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 MAGIXQ9H6Y5 334 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 POLE4Q9NR33 117 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 ZNF275Q9NSD4 429 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 ZDHHC8Q9ULC8 765 aa14.18□□□□□ -0.14
PDLIM2-217ENST00000491330 UNC119BA6NIH7 251 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 SGCEO43556 437 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 TIMM8AO60220 97 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 GADD45GO95257 159 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 FABP3P05413 133 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 COL8A2P25067 703 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 NOS3P29474 1203 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 CENPAP49450 140 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 AQP6Q13520 282 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 KRR1Q13601 381 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 CCNIQ14094 377 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 MBNL2Q5VZF2 373 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 TBPL2Q6SJ96 375 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 JAZF1Q86VZ6 243 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms