RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 CD247P20963 164 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 SLC18A1P54219 525 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 PAX8Q06710 450 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 CD47Q08722 323 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 HNRNPA0Q13151 305 aaKnown RBP17.37■□□□□ 0.37
CLIP2-208ENST00000491075 TAF11Q15544 211 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 CYP51A1Q16850 503 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 ARMC4Q5T2S8 1044 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 FAM27BQ5VT28 67 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 SPATC1Q76KD6 591 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 ZBTB9Q96C00 473 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 NMD3Q96D46 503 aaKnown RBP17.37■□□□□ 0.37
CLIP2-208ENST00000491075 SAMD8Q96LT4 415 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 OR2H1Q9GZK4 316 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 LRCH1Q9Y2L9 728 aa17.37■□□□□ 0.37
CLIP2-208ENST00000491075 A0A1B0GUS0 222 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 NPIPB13A6NJU9 1138 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 NPIPB4C9JG80 1138 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 NGFP01138 241 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 MT-ND1P03886 318 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 IGHV4-38-2P0DP08 117 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 GSTM3P21266 225 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 MDH2P40926 338 aaKnown RBP17.36■□□□□ 0.37
CLIP2-208ENST00000491075 FMODQ06828 376 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 ZMYND11Q15326 602 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 C16orf87Q6PH81 154 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 ARL9Q6T311 187 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 NSMAFQ92636 917 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 TAF15Q92804 592 aaKnown RBP eCLIP17.36■□□□□ 0.37
CLIP2-208ENST00000491075 PRSS27Q9BQR3 290 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 WNT5BQ9H1J7 359 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 NKIRAS1Q9NYS0 192 aa17.36■□□□□ 0.37
CLIP2-208ENST00000491075 IGKV1D-43A0A0B4J1Z2 117 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 ERLIN1O75477 346 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 OR7A10O76100 309 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 PLATP00750 562 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 CST2P09228 141 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 FUT1P19526 365 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 CD80P33681 288 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 AQP2P41181 271 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 PCBD1P61457 104 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 PSG7Q13046 419 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 RUNDC3AQ59EK9 446 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 DLEU7Q6UYE1 221 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 PATL1Q86TB9 770 aaKnown RBP17.35■□□□□ 0.37
CLIP2-208ENST00000491075 SLC30A8Q8IWU4 369 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 MUC20Q8N307 709 aaPredicted RBP17.35■□□□□ 0.37
CLIP2-208ENST00000491075 NPEPL1Q8NDH3 523 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 OR2Z1Q8NG97 314 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 HDAC2Q92769 488 aaKnown RBP17.35■□□□□ 0.37
CLIP2-208ENST00000491075 UPRTQ96BW1 309 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 C4orf45Q96LM5 186 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 SIGLEC11Q96RL6 698 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 NANOGQ9H9S0 305 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 MAN2C1Q9NTJ4 1040 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 PPP1R3CQ9UQK1 317 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 TIMM10BQ9Y5J6 103 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 DOCK11Q5JSL3 2073 aa17.35■□□□□ 0.37
CLIP2-208ENST00000491075 SURF4O15260 269 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 TGDSO95455 350 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 GPANK1O95872 356 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 KNG1P01042 644 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 IGF2P01344 180 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 OMGP23515 440 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 CPT2P23786 658 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 PCGF2P35227 344 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 RBM34P42696 430 aaKnown RBP17.34■□□□□ 0.37
CLIP2-208ENST00000491075 SLC25A47Q6Q0C1 308 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 BTNL3Q6UXE8 466 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 WFDC12Q8WWY7 111 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 SGTBQ96EQ0 304 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 SSBP3Q9BWW4 388 aaPredicted RBP17.34■□□□□ 0.37
CLIP2-208ENST00000491075 IL19Q9UHD0 177 aa17.34■□□□□ 0.37
CLIP2-208ENST00000491075 IGHV3OR16-10A0A075B7F0 116 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 CEACAM18A8MTB9 384 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 ABHD16AO95870 558 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 TSPAN19P0C672 248 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 TUBG1P23258 451 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 LAP3P28838 519 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 GUCA1AP43080 201 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-208ENST00000491075 AGKQ53H12 422 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 ZNF362Q5T0B9 420 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-208ENST00000491075 ZNF774Q6NX45 483 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 LRRN1Q6UXK5 716 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 C17orf107Q6ZR85 190 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 PFN4Q8NHR9 129 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 FNDC8Q8TC99 324 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 SLC26A7Q8TE54 656 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 ITLN1Q8WWA0 313 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 RASSF5Q8WWW0 418 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 LIPHQ8WWY8 451 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 THOC1Q96FV9 657 aaKnown RBP17.33■□□□□ 0.36
CLIP2-208ENST00000491075 ALG12Q9BV10 488 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 TXNIPQ9H3M7 391 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 TUBG2Q9NRH3 451 aa17.33■□□□□ 0.36
CLIP2-208ENST00000491075 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.33■□□□□ 0.36
CLIP2-208ENST00000491075 NDRG4Q9ULP0 352 aaKnown RBP17.33■□□□□ 0.36
CLIP2-208ENST00000491075 V9GYY5 206 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-208ENST00000491075 TRAV40A0A0B4J280 105 aa17.32■□□□□ 0.36
CLIP2-208ENST00000491075 KITLGP21583 273 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms