RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ACTC1P68032 377 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 ACTA1P68133 377 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 UGT2A3Q6UWM9 527 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-230ENST00000491028 P2RY8Q86VZ1 359 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 SLC35F2Q8IXU6 374 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 LRRC18Q8N456 261 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 ZNF454Q8N9F8 522 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 ZNF540Q8NDQ6 660 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 IPCEF1Q8WWN9 437 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-230ENST00000491028 HTRA1Q92743 480 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 SH3GL3Q99963 347 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 CDADC1Q9BWV3 514 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 FGF20Q9NP95 211 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-230ENST00000491028 SLC17A5Q9NRA2 495 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 FKBP14Q9NWM8 211 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 CYB5R1Q9UHQ9 305 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 TMEM14AQ9Y6G1 99 aa16.31■□□□□ 0.2
MCF2L-230ENST00000491028 A0A096LPE4 126 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 A0A1W2PPZ6 126 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 NKX2-6A6NCS4 301 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 OR5H1A6NKK0 313 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 J3QKU1 62 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 ZNF593O00488 134 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-230ENST00000491028 UBL3O95164 117 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 OR2T7P0C7T2 308 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 UGT2B10P36537 528 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 GABARAPL2P60520 117 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 UBE2NP61088 152 aaKnown RBP16.3■□□□□ 0.2
MCF2L-230ENST00000491028 FAM27E3Q08E93 113 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 TSC22D1Q15714 1073 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 SLC36A2Q495M3 483 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 HIKESHIQ53FT3 197 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 DPY19L4Q7Z388 723 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 CDC20BQ86Y33 519 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 SKA3Q8IX90 412 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 OR52I1Q8NGK6 324 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 OR2AJ1Q8NGZ0 328 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 OR2T27Q8NH04 317 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 OTOSQ8NHW6 89 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 GGHQ92820 318 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 MOV10Q9HCE1 1003 aaKnown RBP16.3■□□□□ 0.2
MCF2L-230ENST00000491028 CCNB1IP1Q9NPC3 277 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 ASH2LQ9UBL3 628 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 MYRFQ9Y2G1 1151 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 AMDHD2Q9Y303 409 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 LHFPL6Q9Y693 200 aa16.3■□□□□ 0.2
MCF2L-230ENST00000491028 ZNF670-ZNF695F2Z2N8 137 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 J3QRE1 110 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 PHYHO14832 338 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 APOL3O95236 402 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 RAB36O95755 333 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 IGHA1P01876 353 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 PAX7P23759 505 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 CCKARP32238 428 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 CHN2P52757 468 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 SLC35A2P78381 396 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 SORDQ00796 357 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 SCRN3Q0VDG4 424 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 CDSNQ15517 529 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 TIMM23BQ5SRD1 257 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 SLC18B1Q6NT16 456 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 AHSA2Q719I0 299 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 SSX8Q7RTT4 187 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 OR4F15Q8NGB8 312 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 MYDGFQ969H8 173 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 RHNO1Q9BSD3 238 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 COPS4Q9BT78 406 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 JAM3Q9BX67 310 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 ACTR6Q9GZN1 396 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 DUSP21Q9H596 190 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 INPP5EQ9NRR6 644 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 ZNF224Q9NZL3 707 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 DIMT1Q9UNQ2 313 aaKnown RBP16.29■□□□□ 0.2
MCF2L-230ENST00000491028 PCNX1Q96RV3 2341 aa16.29■□□□□ 0.2
MCF2L-230ENST00000491028 PYCARD-AS1I3L0S3 204 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 AGFG2O95081 481 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 TNFAIP8O95379 198 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 WNT11O96014 354 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 LYNP07948 512 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 MMP7P09237 267 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-230ENST00000491028 PPP3CBP16298 524 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 DCKP27707 260 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 ARR3P36575 388 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 CAPZA2P47755 286 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 HIST1H3AP68431 136 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 TFF3Q07654 80 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 ST3GAL4Q11206 333 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 KCTD21Q4G0X4 260 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 HIST2H3PS2Q5TEC6 136 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 OTPQ5XKR4 325 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 TMEM53Q6P2H8 277 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 HIST2H3AQ71DI3 136 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 LINC00346Q8IVM7 164 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 STX19Q8N4C7 294 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 GJC3Q8NFK1 279 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 S100PBPQ96BU1 408 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 FBXO17Q96EF6 278 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 TMEM80Q96HE8 168 aa16.28■□□□□ 0.2
MCF2L-230ENST00000491028 NR1H4Q96RI1 486 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms