RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833		A0A1B0GVT2	93 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	TMEM269	A0A1B0GVZ9	245 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833		A0A1W2PQ72	361 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	LOC390937	A0A1W2PQ73	354 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	LIPT2	A6NK58	231 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	HMSD	A8MTL9	139 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833		B4E171	279 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	FTCDNL1	E5RQL4	147 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833		K7ESF4	209 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	TPD52L2	O43399	206 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ICMT	O60725	284 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	NOS1AP	O75052	506 aa	Predicted RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	MTRF1	O75570	445 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	NTN1	O95631	604 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	CYB5A	P00167	134 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ALDOB	P05062	364 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	SPARC	P09486	303 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF883	P0CG24	379 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	SULT1A3	P0DMM9	295 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	SULT1A4	P0DMN0	295 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	TFPI	P10646	304 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	GABRA1	P14867	456 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF17	P17021	662 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF43	P17038	809 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	HOXB4	P17483	251 aa	Predicted RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	MPZ	P25189	248 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	CTSS	P25774	331 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	MAOB	P27338	520 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	PTGS2	P35354	604 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	TSPAN7	P41732	249 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	AP2S1	P53680	142 aa	Predicted RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	OR10A3	P58181	314 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	CLRN1	P58418	232 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	TAS2R20	P59543	309 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	UBE2M	P61081	183 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	CYCS	P99999	105 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	C19orf57	Q0VDD7	668 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	KCNAB1	Q14722	419 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	TAF13	Q15543	124 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	C1orf100	Q5SVJ3	147 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	PDSS1	Q5T2R2	415 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	BCL2L15	Q5TBC7	163 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	GLDN	Q6ZMI3	551 aa	Predicted RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	SSX6	Q7RTT6	188 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	OR2W3	Q7Z3T1	314 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	LRRTM1	Q86UE6	522 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	NR2C2AP	Q86WQ0	139 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	SLC22A24	Q8N4F4	322 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	METTL27	Q8N6F8	245 aa	Predicted RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	PNLDC1	Q8NA58	520 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	GATS	Q8NAP1	163 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	APCDD1L	Q8NCL9	501 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	DNAAF1	Q8NEP3	725 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	OR4K17	Q8NGC6	315 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	SAP25	Q8TEE9	199 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	RNF133	Q8WVZ7	376 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	KCNE4	Q8WWG9	221 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ASB5	Q8WWX0	329 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ASB10	Q8WXI3	467 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	TSLP	Q969D9	159 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	SPACA9	Q96E40	222 aa	Predicted RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	RNF31	Q96EP0	1072 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ZC3H10	Q96K80	434 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	OR6C1	Q96RD1	312 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	DCLRE1C	Q96SD1	692 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ABHD6	Q9BV23	337 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	PTDSS2	Q9BVG9	487 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	SF3B5	Q9BWJ5	86 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF436	Q9C0F3	470 aa	Predicted RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	C20orf85	Q9H1P6	137 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	PPIL3	Q9H2H8	161 aa	Known RBP	5.69	□□□□□ -1.5
FN1-223	ENST00000490833	MED11	Q9P086	117 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	OR5V1	Q9UGF6	321 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF222	Q9UK12	451 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	PILRB	Q9UKJ0	227 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	OR52A1	Q9UKL2	312 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	MAB21L2	Q9Y586	359 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	WIF1	Q9Y5W5	379 aa		5.69	□□□□□ -1.5
FN1-223	ENST00000490833	ATG2B	Q96BY7	2078 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	MYO9B	Q13459	2157 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	OR6C65	A6NJZ3	312 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	DHRS7C	A6NNS2	312 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF878	C9JN71	531 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PRSS44	E7EML9	344 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	C11orf98	E9PRG8	122 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	MS4A18	H0YCH9	400 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PIN1P1	O15428	100 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	FABP7	O15540	132 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	LAMTOR5	O43504	91 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF780A	O75290	641 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	CBR3	O75828	277 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	AKR7A3	O95154	331 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	TPO	P07202	933 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	CD3G	P09693	182 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	IGFBP3	P17936	291 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	RAB3A	P20336	220 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	DNASE1	P24855	282 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	CDK2	P24941	298 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	MST1	P26927	711 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	BDKRB2	P30411	391 aa		5.68	□□□□□ -1.5

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