RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	AHCYL1	O43865	530 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	ENTPD5	O75356	428 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	GYPB	P06028	91 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	OR4A8	P0C604	315 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	GAA	P10253	952 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	PAX7	P23759	505 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	ATP6AP1	Q15904	470 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	MST1L	Q2TV78	715 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	ZNF544	Q6NX49	715 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	GLB1L2	Q8IW92	636 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	SLC37A3	Q8NCC5	494 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	ICA1L	Q8NDH6	482 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	OR4F15	Q8NGB8	312 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	TEX47	Q8TBZ9	253 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	SEMA6A	Q9H2E6	1030 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	MED20	Q9H944	212 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	KIF17	Q9P2E2	1029 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	AP4S1	Q9Y587	144 aa		16.03	■□□□□ 0.16
C4A-256	ENST00000490663	LOC100509620	A0A075B734	347 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	IQCM	A0A1B0GVH7	501 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	ARRDC5	A6NEK1	342 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	LY6H	O94772	140 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	IGHV4-39	P01824	125 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	CLU	P10909	449 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	NR4A1	P22736	598 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	APLNR	P35414	380 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	GUCA1A	P43080	201 aa	Predicted RBP	16.02	■□□□□ 0.16
C4A-256	ENST00000490663	GALK2	Q01415	458 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	PLP2	Q04941	152 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	CRMP1	Q14194	572 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	ZNF362	Q5T0B9	420 aa	Predicted RBP	16.02	■□□□□ 0.16
C4A-256	ENST00000490663	SHQ1	Q6PI26	577 aa	Known RBP	16.02	■□□□□ 0.16
C4A-256	ENST00000490663	CORO6	Q6QEF8	472 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	YTHDF3	Q7Z739	585 aa	Known RBP	16.02	■□□□□ 0.16
C4A-256	ENST00000490663	LRP11	Q86VZ4	500 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	SVOPL	Q8N434	492 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	LNX2	Q8N448	690 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	ATG16L2	Q8NAA4	619 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	NUP37	Q8NFH4	326 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	GSX2	Q9BZM3	304 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	ZNF701	Q9NV72	531 aa	Predicted RBP	16.02	■□□□□ 0.16
C4A-256	ENST00000490663	POLR1D	Q9Y2S0	133 aa		16.02	■□□□□ 0.16
C4A-256	ENST00000490663	ZAN	Q9Y493	2812 aa		16.02	■□□□□ 0.15
C4A-256	ENST00000490663	TVP23A	A6NH52	213 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	FAM183A	A6NL82	134 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	IDH3B	O43837	385 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	DOK2	O60496	412 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	MITF	O75030	526 aa	Predicted RBP	16.01	■□□□□ 0.15
C4A-256	ENST00000490663	STOM	P27105	288 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	RPS27	P42677	84 aa	Known RBP	16.01	■□□□□ 0.15
C4A-256	ENST00000490663	DAP	P51397	102 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	GK3P	Q14409	553 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	TBC1D28	Q2M2D7	210 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	TMEM236	Q5W0B7	351 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	ACSM5	Q6NUN0	579 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	DNM1P34	Q6PK57	102 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	SPNS3	Q6ZMD2	512 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	LINC00346	Q8IVM7	164 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	OR2T33	Q8NG76	320 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	OR5K1	Q8NHB7	308 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	SLC7A6	Q92536	515 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663		Q96MF0	132 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	SYT3	Q9BQG1	590 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	MRPL37	Q9BZE1	423 aa	Known RBP	16.01	■□□□□ 0.15
C4A-256	ENST00000490663	MYEF2	Q9P2K5	600 aa	Known RBP	16.01	■□□□□ 0.15
C4A-256	ENST00000490663	ASH2L	Q9UBL3	628 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	FBXL3	Q9UKT7	428 aa		16.01	■□□□□ 0.15
C4A-256	ENST00000490663	C5orf49	A4QMS7	147 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	SAC3D1	A6NKF1	404 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	C12orf71	A8MTZ7	269 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	HLA-DQA2	P01906	255 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	TF	P02787	698 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	PSKH1	P11801	424 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	ZNF23	P17027	643 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	HOXB6	P17509	224 aa	Known RBP	16	■□□□□ 0.15
C4A-256	ENST00000490663	FAS	P25445	335 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	CRABP1	P29762	137 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	SERPINF1	P36955	418 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	WNT5A	P41221	380 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	GINS1	Q14691	196 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	SPATA46	Q5T0L3	261 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	CD300LD	Q6UXZ3	194 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	DPPA2	Q7Z7J5	298 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	TGIF2LY	Q8IUE0	185 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	LRRC75A-AS1	Q8N1F1	130 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	ZCCHC24	Q8N2G6	241 aa	Known RBP	16	■□□□□ 0.15
C4A-256	ENST00000490663	PROKR2	Q8NFJ6	384 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	IL17RD	Q8NFM7	739 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	SLC26A10	Q8NG04	563 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	OTULIN	Q96BN8	352 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	DUS3L	Q96G46	650 aa	Known RBP	16	■□□□□ 0.15
C4A-256	ENST00000490663	POM121L2	Q96KW2	1035 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	SNX18	Q96RF0	628 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	DDO	Q99489	341 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	HCAR1	Q9BXC0	346 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	RACGAP1	Q9H0H5	632 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	ZNF556	Q9HAH1	456 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	MRPL22	Q9NWU5	206 aa	Known RBP	16	■□□□□ 0.15
C4A-256	ENST00000490663	LHFPL6	Q9Y693	200 aa		16	■□□□□ 0.15
C4A-256	ENST00000490663	DYSF	O75923	2080 aa		15.99	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms