RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 MRPL38Q96DV4 380 aaKnown RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SLC35E1Q96K37 410 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 CTDSP2O14595 271 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 PPP1R2P9O14990 202 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 PLRG1O43660 514 aaKnown RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 OGFOD3Q6PK18 319 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 RNF165Q6ZSG1 346 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 PRICKLE2Q7Z3G6 844 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 UBE2ZQ9H832 354 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 AGPAT2O15120 278 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SGCEO43556 437 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 LIM2P55344 173 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ACOT6Q3I5F7 207 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF836Q6ZNA1 936 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 PAQR9Q6ZVX9 377 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SLC35B4Q969S0 331 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SHARPINQ9H0F6 387 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 KLF13Q9Y2Y9 288 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 TRIM23P36406 574 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 IAH1Q2TAA2 248 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 VRK3Q8IV63 474 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 MRGPRX4Q96LA9 322 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SOX7Q9BT81 388 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SORBS1Q9BX66 1292 aaKnown RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 FGF21Q9NSA1 209 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 KIAA1456Q9P272 454 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 J3KTA2 159 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF354AO60765 605 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 MAGEB1P43366 347 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 HSF1Q00613 529 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 FLI1Q01543 452 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 RAB35Q15286 201 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ABI3BPQ7Z7G0 1075 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 GSX2Q9BZM3 304 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 AMBRA1Q9C0C7 1298 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 HEYLQ9NQ87 328 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 PISDQ9UG56 409 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 USP22Q9UPT9 525 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 PLXNB2O15031 1838 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ZAR1LA6NP61 321 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 MEIS3P2A8K0S8 358 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 BCL6P41182 706 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 BPIFB3P59826 476 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ERHP84090 104 aaKnown RBP8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SSX2Q16385 188 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 CDKN3Q16667 212 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 LRRC26Q2I0M4 334 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 SYT14P1Q58G82 188 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 OR2G6Q5TZ20 316 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ANGPTL5Q86XS5 388 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 ARIH2OSQ8N7S6 290 aa8.12□□□□□ -1.11
LSAMP-205ENST00000490035 A0A1B0GUH1 482 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TCRBV5S1A1TA0A578 114 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 FABP7O15540 132 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 SORBS2O94875 1100 aaKnown RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 RAB5AP20339 215 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF626Q68DY1 528 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 BAGE2Q86Y30 109 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TSLPQ969D9 159 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 MEIS3P1A6NDR6 274 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 ACOD1A6NK06 481 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 PLPP1O14494 284 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 DOK2O60496 412 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 SNRPBP14678 240 aaKnown RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 NKX2-1P43699 371 aaPredicted RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 OR13C9Q8NGT0 318 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 ATF6BQ99941 703 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF331Q9NQX6 463 aaPredicted RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TO15178 435 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 PPICP45877 212 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 MRPL19P49406 292 aaKnown RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TANGO2Q6ICL3 276 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 OR2A2Q6IF42 318 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 DBX2Q6ZNG2 339 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 Q8IYB0 196 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 NHLRC2Q8NBF2 726 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TTC9Q92623 222 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 DNAJA3Q96EY1 480 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 NMNAT3Q96T66 252 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 COQ3Q9NZJ6 369 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TDRD6O60522 2096 aaKnown RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 ZDHHC11BP0C7U3 371 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 FZD2Q14332 565 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 EBPQ15125 230 aaKnown RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TEAD3Q99594 435 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 DAPP1Q9UN19 280 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 F10P00742 488 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TCN2P20062 427 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 OR8B8Q15620 311 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 DCXRQ7Z4W1 244 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 BSCL2Q96G97 398 aaPredicted RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 SLC5A6Q9Y289 635 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 YTHDF2Q9Y5A9 579 aaKnown RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 FBP1P09467 338 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 RAD52P43351 418 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 TCTE3Q8IZS6 198 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 MS4A4AQ96JQ5 239 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms