RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PEX5LQ8IYB4 626 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 FNDC5Q8NAU1 212 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 SCCPDHQ8NBX0 429 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 OR8B3Q8NGG8 313 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 OR52P1PQ8NH57 321 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 PPP1R35Q8TAP8 253 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 ZNF420Q8TAQ5 688 aaPredicted RBP7.56□□□□□ -1.2
SSBP1-212ENST00000489378 ABHD4Q8TB40 342 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 LHX4Q969G2 390 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 SLC38A4Q969I6 547 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 POM121L2Q96KW2 1035 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 WDFY2Q96P53 400 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 OR8B2Q96RD0 313 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 SLC35A5Q9BS91 424 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 SEMA6AQ9H2E6 1030 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 PPA2Q9H2U2 334 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 GCM1Q9NP62 436 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 CLN8Q9UBY8 286 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 ZNF443Q9Y2A4 671 aaPredicted RBP7.56□□□□□ -1.2
SSBP1-212ENST00000489378 U3KQK5 164 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 TRAV36DV7A0A075B6V5 113 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 C5orf49A4QMS7 147 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 ANKRD61A6NGH8 418 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 CHRNGP07510 517 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 TNFSF4P23510 183 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 CLDN8P56748 225 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 SLC7A5Q01650 507 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 PUDPQ08623 228 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 COX10Q12887 443 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 PSG7Q13046 419 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 CASC10Q5T4H9 136 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 ZNF841Q6ZN19 808 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 NLRC3Q7RTR2 1065 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 NET1Q7Z628 596 aaPredicted RBP7.55□□□□□ -1.2
SSBP1-212ENST00000489378 DPPA2Q7Z7J5 298 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 LRRC18Q8N456 261 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 HIPK4Q8NE63 616 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 MOGAT1Q96PD6 335 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 OR2V2Q96R30 315 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 RHOXF2Q9BQY4 288 aa7.55□□□□□ -1.2
SSBP1-212ENST00000489378 EIF3KQ9UBQ5 218 aaKnown RBP7.55□□□□□ -1.2
SSBP1-212ENST00000489378 LCE6AA0A183 80 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 TMEM238LA0A1B0GVL6 79 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 BTBD17A6NE02 478 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 LRRN3E7EW58 273 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 RNASEK-C17orf49H0YIS7 233 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 PHYHO14832 338 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 GLRA3O75311 464 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 ENTPD5O75356 428 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 SCGB1D2O95969 90 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 BGLAPP02818 100 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 FGF4P08620 206 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 AHCYP23526 432 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 ADMP35318 185 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 GNG11P61952 73 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 ZNF404Q494X3 552 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 RNF220Q5VTB9 566 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 PXKQ7Z7A4 578 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 WFDC9Q8NEX5 89 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 AKR7LQ8NHP1 331 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 AGR3Q8TD06 166 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 SIRPDQ9H106 197 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 POFUT1Q9H488 388 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 ZNRD1Q9P1U0 126 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 IL19Q9UHD0 177 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 DCDC2Q9UHG0 476 aa7.54□□□□□ -1.2
SSBP1-212ENST00000489378 A0A087WUV0 522 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-212ENST00000489378 IGHV3-64DA0A0J9YX35 117 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 PRSS51A0A1B0GVH4 220 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 A0A1B0GWA3 101 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 H3BSA7 217 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 PLPP3O14495 311 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 ZSCAN12O43309 604 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 PLIN3O60664 434 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 QDPRP09417 244 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 VSIG10L2P0DP72 767 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 CD28P10747 220 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 CPA3P15088 417 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 ZNF32P17041 273 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 EPHA3P29320 983 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 ETV4P43268 484 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 GDI2P50395 445 aaKnown RBP7.53□□□□□ -1.2
SSBP1-212ENST00000489378 EMX1Q04741 257 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-212ENST00000489378 RPS26P11Q5JNZ5 115 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-212ENST00000489378 C5orf46Q6UWT4 87 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 PTOV1Q86YD1 416 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 C10orf107Q8IVU9 208 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 LRRC34Q8IZ02 419 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 SCAIQ8N9R8 606 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 OR4F17Q8NGA8 305 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 OR8J2Q8NGG1 315 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 OR6X1Q8NH79 312 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 VANGL1Q8TAA9 524 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-212ENST00000489378 ACMSDQ8TDX5 336 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 MZB1Q8WU39 189 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 OR4F4Q96R69 305 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 CITED4Q96RK1 184 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 ASPNQ9BXN1 380 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 CNTD2Q9H8S5 307 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms