RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MOGQ16653 247 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 MICAQ29983 383 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 LEG1Q6P5S2 330 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 PGM2L1Q6PCE3 622 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 ARL9Q6T311 187 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF620Q6ZNG0 422 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 AQP11Q8NBQ7 271 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 ICA1LQ8NDH6 482 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 OR9Q2Q8NGE9 314 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 NEU4Q8WWR8 484 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-218ENST00000489037 SLC7A6OSQ96CW6 309 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-218ENST00000489037 SORCS2Q96PQ0 1159 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF416Q9BWM5 594 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 CHID1Q9BWS9 393 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 MRPL37Q9BZE1 423 aaKnown RBP12.31□□□□□ -0.44
BRCA1-218ENST00000489037 OR2H1Q9GZK4 316 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 OR51B6Q9H340 312 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 MS4A5Q9H3V2 200 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 COA3Q9Y2R0 106 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-218ENST00000489037 POLR1DQ9Y2S0 133 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 CDH10Q9Y6N8 788 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 U3KQV3 271 aa12.31□□□□□ -0.44
BRCA1-218ENST00000489037 CR1P17927 2039 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 ABCA1O95477 2261 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 A0A1W2PPW3 197 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 TMEM129A0AVI4 362 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 C5orf49A4QMS7 147 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 M0R233 179 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 GASTP01350 101 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 TP53P04637 393 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-218ENST00000489037 SLC25A16P16260 332 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 CTLA4P16410 223 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 CDKN2AP42771 156 aaKnown RBP12.3□□□□□ -0.44
BRCA1-218ENST00000489037 LSM6P62312 80 aaKnown RBP12.3□□□□□ -0.44
BRCA1-218ENST00000489037 PPP1R8Q12972 351 aaKnown RBP12.3□□□□□ -0.44
BRCA1-218ENST00000489037 BNIP1Q12981 228 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 ENDOGQ14249 297 aaKnown RBP12.3□□□□□ -0.44
BRCA1-218ENST00000489037 CARTPTQ16568 116 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 PTCHD4Q6ZW05 846 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 C1orf174Q8IYL3 243 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF525Q8N782 197 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 CPEB3Q8NE35 698 aaKnown RBP12.3□□□□□ -0.44
BRCA1-218ENST00000489037 OR4C15Q8NGM1 316 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 OR4K13Q8NH42 304 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 SYNPRQ8TBG9 265 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 FOXN4Q96NZ1 517 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 SNX18Q96RF0 628 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 SMR3AQ99954 134 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 SYT3Q9BQG1 590 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 NUAK2Q9H093 628 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 SRA1Q9HD15 236 aaKnown RBP12.3□□□□□ -0.44
BRCA1-218ENST00000489037 EMC7Q9NPA0 242 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 REV1Q9UBZ9 1251 aa12.3□□□□□ -0.44
BRCA1-218ENST00000489037 NDRG4Q9ULP0 352 aaKnown RBP12.3□□□□□ -0.44
BRCA1-218ENST00000489037 TLN2Q9Y4G6 2542 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 NDUFS8O00217 210 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 SGCEO43556 437 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 LY6G6DO95868 133 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 MT-ND5P03915 603 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 HEXAP06865 529 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 ADRA2AP08913 450 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 COX5BP10606 129 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 HIST1H1CP16403 213 aaKnown RBP12.29□□□□□ -0.44
BRCA1-218ENST00000489037 GCH1P30793 250 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 ARHGDIAP52565 204 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 KLF3P57682 345 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-218ENST00000489037 AQP6Q13520 282 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 NKPD1Q17RQ9 610 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 SLC36A3Q495N2 470 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 CLEC12AQ5QGZ9 265 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF774Q6NX45 483 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 DNM1P46Q6ZS02 220 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 RASSF6Q6ZTQ3 369 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 ADGRG5Q8IZF4 528 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 PAQR4Q8N4S7 273 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-218ENST00000489037 OR10H5Q8NGA6 315 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 OR52E2Q8NGJ4 325 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 OR1J1Q8NGS3 322 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 GIPC3Q8TF64 312 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 SNX33Q8WV41 574 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 CANT1Q8WVQ1 401 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 POM121L2Q96KW2 1035 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 NMNAT3Q96T66 252 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 PIMREGQ9BSJ6 248 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 WNT5BQ9H1J7 359 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 EGLN3Q9H6Z9 239 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 ELOVL3Q9HB03 270 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 TBC1D23Q9NUY8 699 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 SLCO1C1Q9NYB5 712 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 FZR1Q9UM11 496 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 B9D1Q9UPM9 204 aa12.29□□□□□ -0.44
BRCA1-218ENST00000489037 IGHV4-30-2A0A087WSY4 118 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 LOC390937A0A1W2PQ73 354 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 GSC2O15499 205 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 DOK2O60496 412 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 E2F6O75461 281 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 HTR5AP47898 357 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 GLO1Q04760 184 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms