RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SOHLH1Q5JUK2 328 aa2□□□□□ -2.09
RFC4-213ENST00000489028 SPESP1Q6UW49 350 aa2□□□□□ -2.09
RFC4-213ENST00000489028 TMEM179Q6ZVK1 233 aa2□□□□□ -2.09
RFC4-213ENST00000489028 VTCN1Q7Z7D3 282 aa2□□□□□ -2.09
RFC4-213ENST00000489028 ZADH2Q8N4Q0 377 aa2□□□□□ -2.09
RFC4-213ENST00000489028 ZNF321PQ8N8H1 164 aa2□□□□□ -2.09
RFC4-213ENST00000489028 DUSP18Q8NEJ0 188 aa2□□□□□ -2.09
RFC4-213ENST00000489028 CCDC54Q8NEL0 328 aa2□□□□□ -2.09
RFC4-213ENST00000489028 NPBQ8NG41 125 aa2□□□□□ -2.09
RFC4-213ENST00000489028 OR9G4Q8NGQ1 327 aa2□□□□□ -2.09
RFC4-213ENST00000489028 OR10R2Q8NGX6 335 aa2□□□□□ -2.09
RFC4-213ENST00000489028 OR2G3Q8NGZ4 309 aa2□□□□□ -2.09
RFC4-213ENST00000489028 LYPD6BQ8NI32 183 aa2□□□□□ -2.09
RFC4-213ENST00000489028 ZNF596Q8TC21 504 aa2□□□□□ -2.09
RFC4-213ENST00000489028 CAPSLQ8WWF8 208 aa2□□□□□ -2.09
RFC4-213ENST00000489028 NDRG1Q92597 394 aaKnown RBP2□□□□□ -2.09
RFC4-213ENST00000489028 TMEM54Q969K7 222 aa2□□□□□ -2.09
RFC4-213ENST00000489028 DNAJC1Q96KC8 554 aaKnown RBP2□□□□□ -2.09
RFC4-213ENST00000489028 HDHD3Q9BSH5 251 aaPredicted RBP2□□□□□ -2.09
RFC4-213ENST00000489028 RSPO3Q9BXY4 272 aaPredicted RBP2□□□□□ -2.09
RFC4-213ENST00000489028 IL22Q9GZX6 179 aa2□□□□□ -2.09
RFC4-213ENST00000489028 RGCCQ9H4X1 137 aa2□□□□□ -2.09
RFC4-213ENST00000489028 TDRD3Q9H7E2 651 aaKnown RBP2□□□□□ -2.09
RFC4-213ENST00000489028 EML4Q9HC35 981 aaKnown RBP2□□□□□ -2.09
RFC4-213ENST00000489028 LYRM4Q9HD34 91 aa2□□□□□ -2.09
RFC4-213ENST00000489028 MTCH1Q9NZJ7 389 aa2□□□□□ -2.09
RFC4-213ENST00000489028 CCDC59Q9P031 241 aaKnown RBP2□□□□□ -2.09
RFC4-213ENST00000489028 CLCF1Q9UBD9 225 aa2□□□□□ -2.09
RFC4-213ENST00000489028 SLC17A4Q9Y2C5 497 aa2□□□□□ -2.09
RFC4-213ENST00000489028 PHLPP2Q6ZVD8 1323 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 IGLV4-60A0A075B6I1 120 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 TRAV39A0A0B4J263 110 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 A0A0G2JN53 185 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 KIR2DL5BA0A0G2JN68 375 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 KIR2DL5BA0A0G2JPC4 375 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 F6UB75 175 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 TEX46H3BTG2 121 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 XKRYO14609 159 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 OTCP00480 354 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 HLA-HP01893 362 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 SERPINA5P05154 406 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 RETP07949 1114 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ACSM4P0C7M7 580 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 UBCP0CG48 685 aaKnown RBP1.99□□□□□ -2.09
RFC4-213ENST00000489028 HOXA9P31269 272 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 TNFSF9P41273 254 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 OR1G1P47890 313 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 SLC11A1P49279 550 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ZNF136P52737 540 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 DAOAP59103 153 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 RAD51Q06609 339 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ILKQ13418 452 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 TMED1Q13445 227 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 AQP6Q13520 282 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ITIH4Q14624 930 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 TRAM2Q15035 370 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 NCF4Q15080 339 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 PSMD5Q16401 504 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 LY6EQ16553 131 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 HIKESHIQ53FT3 197 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 HSP90AA4PQ58FG1 418 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 LRRC10Q5BKY1 277 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ZNF621Q6ZSS3 439 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 APRG1Q8IVJ8 170 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ZNF695Q8IW36 515 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 CMTM1Q8IZ96 169 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 TMEM61Q8N0U2 210 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 KIR2DL5AQ8N109 375 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 OR4F15Q8NGB8 312 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 OR5B3Q8NH48 314 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 GIMAP1Q8WWP7 306 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 GEMIN6Q8WXD5 167 aaKnown RBP1.99□□□□□ -2.09
RFC4-213ENST00000489028 CEP170P1Q96L14 293 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 CFAP53Q96M91 514 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 OPALINQ96PE5 141 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 P2RX4Q99571 388 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ZYG11BQ9C0D3 744 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ACTR3CQ9C0K3 210 aaPredicted RBP1.99□□□□□ -2.09
RFC4-213ENST00000489028 TPK1Q9H3S4 243 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 CYP3A43Q9HB55 503 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 PXMP2Q9NR77 195 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 CCL28Q9NRJ3 127 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 AHSPQ9NZD4 102 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 MYEF2Q9P2K5 600 aaKnown RBP1.99□□□□□ -2.09
RFC4-213ENST00000489028 NUFIP1Q9UHK0 495 aaKnown RBP1.99□□□□□ -2.09
RFC4-213ENST00000489028 TRAPPC4Q9Y296 219 aa1.99□□□□□ -2.09
RFC4-213ENST00000489028 ZNF816-ZNF321PA0A0X1KG74 233 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 A0A1B0GVI7 797 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 A0A1W2PRD5 423 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 ZNF726A6NNF4 738 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 ZNF701M0R085 212 aaPredicted RBP1.98□□□□□ -2.09
RFC4-213ENST00000489028 PEX7O00628 323 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 SCAMP2O15127 329 aaKnown RBP1.98□□□□□ -2.09
RFC4-213ENST00000489028 AIREO43918 545 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 FKBP6O75344 327 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CLDN11O75508 207 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CD5P06127 495 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CT45A6P0DMU7 189 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CT45A5P0DMU8 189 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CT45A7P0DMV0 189 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms