RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 STX10O60499 249 aa2.54□□□□□ -2
SSR1-209ENST00000488834 NPIPB7O75200 414 aa2.54□□□□□ -2
SSR1-209ENST00000488834 CBR3O75828 277 aa2.54□□□□□ -2
SSR1-209ENST00000488834 P04436 131 aa2.54□□□□□ -2
SSR1-209ENST00000488834 SNRPAP09012 282 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 PRPS2P11908 318 aa2.54□□□□□ -2
SSR1-209ENST00000488834 ATP1B2P14415 290 aaPredicted RBP2.54□□□□□ -2
SSR1-209ENST00000488834 CCNB1P14635 433 aa2.54□□□□□ -2
SSR1-209ENST00000488834 NQO1P15559 274 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 IMPDH1P20839 514 aa2.54□□□□□ -2
SSR1-209ENST00000488834 GSTM3P21266 225 aa2.54□□□□□ -2
SSR1-209ENST00000488834 RORAP35398 523 aa2.54□□□□□ -2
SSR1-209ENST00000488834 PCK1P35558 622 aa2.54□□□□□ -2
SSR1-209ENST00000488834 SLC26A3P40879 764 aa2.54□□□□□ -2
SSR1-209ENST00000488834 RPS10P46783 165 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 GSSP48637 474 aa2.54□□□□□ -2
SSR1-209ENST00000488834 CSNK1DP48730 415 aa2.54□□□□□ -2
SSR1-209ENST00000488834 HNRNPA3P51991 378 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 HSPA2P54652 639 aa2.54□□□□□ -2
SSR1-209ENST00000488834 KDSRQ06136 332 aa2.54□□□□□ -2
SSR1-209ENST00000488834 STK38Q15208 465 aa2.54□□□□□ -2
SSR1-209ENST00000488834 CYTH1Q15438 398 aa2.54□□□□□ -2
SSR1-209ENST00000488834 LIN52Q52LA3 116 aa2.54□□□□□ -2
SSR1-209ENST00000488834 BEND3Q5T5X7 828 aa2.54□□□□□ -2
SSR1-209ENST00000488834 C1orf146Q5VVC0 180 aa2.54□□□□□ -2
SSR1-209ENST00000488834 SPOPLQ6IQ16 392 aa2.54□□□□□ -2
SSR1-209ENST00000488834 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SSR1-209ENST00000488834 GDPD3Q7L5L3 318 aa2.54□□□□□ -2
SSR1-209ENST00000488834 SSX9Q7RTT3 188 aa2.54□□□□□ -2
SSR1-209ENST00000488834 MMAAQ8IVH4 418 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 C12orf56Q8IXR9 622 aa2.54□□□□□ -2
SSR1-209ENST00000488834 SVOPLQ8N434 492 aa2.54□□□□□ -2
SSR1-209ENST00000488834 ZNF565Q8N9K5 539 aa2.54□□□□□ -2
SSR1-209ENST00000488834 FNDC5Q8NAU1 212 aa2.54□□□□□ -2
SSR1-209ENST00000488834 MFSD9Q8NBP5 474 aa2.54□□□□□ -2
SSR1-209ENST00000488834 ZNF680Q8NEM1 530 aa2.54□□□□□ -2
SSR1-209ENST00000488834 PROKR2Q8NFJ6 384 aa2.54□□□□□ -2
SSR1-209ENST00000488834 TTLQ8NG68 377 aa2.54□□□□□ -2
SSR1-209ENST00000488834 OR1F12Q8NHA8 337 aa2.54□□□□□ -2
SSR1-209ENST00000488834 NAT14Q8WUY8 206 aa2.54□□□□□ -2
SSR1-209ENST00000488834 HTR3CQ8WXA8 447 aa2.54□□□□□ -2
SSR1-209ENST00000488834 CIDECQ96AQ7 238 aaPredicted RBP2.54□□□□□ -2
SSR1-209ENST00000488834 CERS2Q96G23 380 aa2.54□□□□□ -2
SSR1-209ENST00000488834 SEC22AQ96IW7 307 aa2.54□□□□□ -2
SSR1-209ENST00000488834 OPALINQ96PE5 141 aa2.54□□□□□ -2
SSR1-209ENST00000488834 CYTH2Q99418 400 aa2.54□□□□□ -2
SSR1-209ENST00000488834 ACBD6Q9BR61 282 aa2.54□□□□□ -2
SSR1-209ENST00000488834 MFFQ9GZY8 342 aa2.54□□□□□ -2
SSR1-209ENST00000488834 LRRN3Q9H3W5 708 aa2.54□□□□□ -2
SSR1-209ENST00000488834 ELOVL6Q9H5J4 265 aa2.54□□□□□ -2
SSR1-209ENST00000488834 MRPL47Q9HD33 250 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 LYRM4Q9HD34 91 aa2.54□□□□□ -2
SSR1-209ENST00000488834 MRPS30Q9NP92 439 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 C20orf96Q9NUD7 363 aaPredicted RBP2.54□□□□□ -2
SSR1-209ENST00000488834 AIG1Q9NVV5 245 aa2.54□□□□□ -2
SSR1-209ENST00000488834 IL37Q9NZH6 218 aa2.54□□□□□ -2
SSR1-209ENST00000488834 CTSFQ9UBX1 484 aa2.54□□□□□ -2
SSR1-209ENST00000488834 RPL26L1Q9UNX3 145 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 ASF1AQ9Y294 204 aa2.54□□□□□ -2
SSR1-209ENST00000488834 CSDC2Q9Y534 153 aaKnown RBP2.54□□□□□ -2
SSR1-209ENST00000488834 WSB1Q9Y6I7 421 aa2.54□□□□□ -2
SSR1-209ENST00000488834 PSME4Q14997 1843 aa2.54□□□□□ -2
SSR1-209ENST00000488834 NKTRP30414 1462 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 GRIN2AQ12879 1464 aa2.53□□□□□ -2
SSR1-209ENST00000488834 CCDC18Q5T9S5 1454 aa2.53□□□□□ -2
SSR1-209ENST00000488834 NRXN1Q9ULB1 1477 aa2.53□□□□□ -2
SSR1-209ENST00000488834 CPDO75976 1380 aa2.53□□□□□ -2
SSR1-209ENST00000488834 GOLGA8QA0A0J9YX86 632 aa2.53□□□□□ -2
SSR1-209ENST00000488834 C1orf232A0A0U1RR37 186 aa2.53□□□□□ -2
SSR1-209ENST00000488834 A0A1B0GUH1 482 aa2.53□□□□□ -2
SSR1-209ENST00000488834 A0A1B0GUS0 222 aa2.53□□□□□ -2
SSR1-209ENST00000488834 FUOMA2VDF0 154 aa2.53□□□□□ -2
SSR1-209ENST00000488834 LRP5LA4QPB2 252 aa2.53□□□□□ -2
SSR1-209ENST00000488834 PSMB11A5LHX3 300 aa2.53□□□□□ -2
SSR1-209ENST00000488834 GMNCA6NCL1 334 aa2.53□□□□□ -2
SSR1-209ENST00000488834 VSTM2BA6NLU5 285 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SIGLEC16A6NMB1 481 aa2.53□□□□□ -2
SSR1-209ENST00000488834 GJE1A6NN92 205 aa2.53□□□□□ -2
SSR1-209ENST00000488834 IQCF5A8MTL0 148 aa2.53□□□□□ -2
SSR1-209ENST00000488834 TRDCB7Z8K6 153 aa2.53□□□□□ -2
SSR1-209ENST00000488834 DLGAP1O14490 977 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SLC9A3R1O14745 358 aaPredicted RBP2.53□□□□□ -2
SSR1-209ENST00000488834 KDELR3O43731 214 aa2.53□□□□□ -2
SSR1-209ENST00000488834 TRAF3IP2O43734 574 aaPredicted RBP2.53□□□□□ -2
SSR1-209ENST00000488834 PFKFB2O60825 505 aa2.53□□□□□ -2
SSR1-209ENST00000488834 ZNF780AO75290 641 aaPredicted RBP2.53□□□□□ -2
SSR1-209ENST00000488834 OR2F2O95006 317 aa2.53□□□□□ -2
SSR1-209ENST00000488834 KRT75O95678 551 aa2.53□□□□□ -2
SSR1-209ENST00000488834 IFNA14P01570 189 aa2.53□□□□□ -2
SSR1-209ENST00000488834 MMP1P03956 469 aa2.53□□□□□ -2
SSR1-209ENST00000488834 LGALS2P05162 132 aa2.53□□□□□ -2
SSR1-209ENST00000488834 RPS17P08708 135 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 GIPP09681 153 aaPredicted RBP2.53□□□□□ -2
SSR1-209ENST00000488834 ATP6V1B2P21281 511 aa2.53□□□□□ -2
SSR1-209ENST00000488834 HMGB2P26583 209 aaKnown RBP2.53□□□□□ -2
SSR1-209ENST00000488834 GCAP28676 217 aa2.53□□□□□ -2
SSR1-209ENST00000488834 PHBP35232 272 aa2.53□□□□□ -2
SSR1-209ENST00000488834 SPAM1P38567 509 aa2.53□□□□□ -2
SSR1-209ENST00000488834 CTRLP40313 264 aa2.53□□□□□ -2
SSR1-209ENST00000488834 P2RY1P47900 373 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms