RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SLC27A4Q6P1M0 643 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 ZDHHC13Q8IUH4 622 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 DEPDC4Q8N2C3 294 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 CYB561A3Q8NBI2 242 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 CPEB3Q8NE35 698 aaKnown RBP16.13■□□□□ 0.17
PTCD3-217ENST00000488801 SMAP2Q8WU79 429 aaPredicted RBP16.13■□□□□ 0.17
PTCD3-217ENST00000488801 PIGTQ969N2 578 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 FOXN4Q96NZ1 517 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 PKP2Q99959 881 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 OR2H1Q9GZK4 316 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 WNT5BQ9H1J7 359 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 SEMA6AQ9H2E6 1030 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 ZNF442Q9H7R0 627 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 PAPOLBQ9NRJ5 636 aaKnown RBP16.13■□□□□ 0.17
PTCD3-217ENST00000488801 OAZ3Q9UMX2 235 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 HIVEP1P15822 2718 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 YLPM1P49750 1951 aaKnown RBP16.13■□□□□ 0.17
PTCD3-217ENST00000488801 ICMTO60725 284 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 MPZL1O95297 269 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 GPANK1O95872 356 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 TFP02787 698 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 NR4A1P22736 598 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 HIST1H3AP68431 136 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 GLO1Q04760 184 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 AQP6Q13520 282 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 ZSCAN26Q16670 478 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 HIST2H3PS2Q5TEC6 136 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 HIST2H3AQ71DI3 136 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 PAQR4Q8N4S7 273 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-217ENST00000488801 SLC30A7Q8NEW0 376 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 ZNRF4Q8WWF5 429 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 C11orf40Q8WZ69 217 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 KCNS3Q9BQ31 491 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 S100A14Q9HCY8 104 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 CCNB1IP1Q9NPC3 277 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 CA10Q9NS85 328 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 ZNF701Q9NV72 531 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-217ENST00000488801 MRPL22Q9NWU5 206 aaKnown RBP16.12■□□□□ 0.17
PTCD3-217ENST00000488801 KIF17Q9P2E2 1029 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 LHFPL6Q9Y693 200 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 TANC2Q9HCD6 1990 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 CR1P17927 2039 aa16.12■□□□□ 0.17
PTCD3-217ENST00000488801 C12orf71A8MTZ7 269 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 CRISP1P54107 249 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 PCBD1P61457 104 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 HSF2Q03933 536 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 GINS1Q14691 196 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 LINC01590Q5TEZ4 76 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 KRTAP1-3Q8IUG1 177 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 LRRC75A-AS1Q8N1F1 130 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 POM121L2Q96KW2 1035 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 OSBPL10Q9BXB5 764 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 GSX2Q9BZM3 304 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 KCNN2Q9H2S1 579 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 RNF121Q9H920 327 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 SRA1Q9HD15 236 aaKnown RBP16.11■□□□□ 0.17
PTCD3-217ENST00000488801 FAIMQ9NVQ4 179 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 POU2F3Q9UKI9 436 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 LAMP3Q9UQV4 416 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 TIMM10BQ9Y5J6 103 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 ATP23Q9Y6H3 246 aa16.11■□□□□ 0.17
PTCD3-217ENST00000488801 ACANP16112 2415 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 LOC100509620A0A075B734 347 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 SURF4O15260 269 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 MITFO75030 526 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-217ENST00000488801 PTHP01270 115 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 IFNGP01579 166 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 COX5BP10606 129 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 ZNF3P17036 446 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 SPI1P17947 270 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 APEX1P27695 318 aaKnown RBP16.1■□□□□ 0.17
PTCD3-217ENST00000488801 APOBEC3AP31941 199 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-217ENST00000488801 GUCA1AP43080 201 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-217ENST00000488801 ESRRGP62508 458 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 SCRN3Q0VDG4 424 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 SNTB2Q13425 540 aaKnown RBP16.1■□□□□ 0.17
PTCD3-217ENST00000488801 ADIPOQQ15848 244 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 MEP1BQ16820 701 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 MSMPQ1L6U9 139 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 SWI5Q1ZZU3 235 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 MST1LQ2TV78 715 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 OTPQ5XKR4 325 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 MUC15Q8N387 334 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 OR2T4Q8NH00 348 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 TMEM171Q8WVE6 324 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 HCAR1Q9BXC0 346 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 GABARAPL3Q9BY60 117 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 RERGLQ9H628 205 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 KRT84Q9NSB2 600 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 CBLN4Q9NTU7 201 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 ATPIF1Q9UII2 106 aa16.1■□□□□ 0.17
PTCD3-217ENST00000488801 IQCMA0A1B0GVH7 501 aa16.09■□□□□ 0.17
PTCD3-217ENST00000488801 RIIAD1A6NNX1 92 aa16.09■□□□□ 0.17
PTCD3-217ENST00000488801 SYNGR3O43761 229 aa16.09■□□□□ 0.17
PTCD3-217ENST00000488801 PCSK6P29122 969 aa16.09■□□□□ 0.17
PTCD3-217ENST00000488801 EPHA2P29317 976 aa16.09■□□□□ 0.17
PTCD3-217ENST00000488801 GGT2P36268 569 aa16.09■□□□□ 0.17
PTCD3-217ENST00000488801 PLP2Q04941 152 aa16.09■□□□□ 0.17
PTCD3-217ENST00000488801 DAG1Q14118 895 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms