RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 EMC7Q9NPA0 242 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 RPRD1BQ9NQG5 326 aaKnown RBP13.02□□□□□ -0.33
CXCL12-207ENST00000488591 KIF17Q9P2E2 1029 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 KLHL21Q9UJP4 597 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 B9D1Q9UPM9 204 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 POLR1DQ9Y2S0 133 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 CMAHPQ9Y471 501 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 FKBP7Q9Y680 259 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 PRRC2AP48634 2157 aaKnown RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 SNAP29O95721 258 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 IFNGP01579 166 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 SCG5P05408 212 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 IGFBP1P08833 259 aaPredicted RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 PRKACGP22612 351 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 CCNOP22674 350 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 APEX1P27695 318 aaKnown RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 POU1F1P28069 291 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 GLRXP35754 106 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 RAD52P43351 418 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 GDI2P50395 445 aaKnown RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 AQP6Q13520 282 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 ENDOGQ14249 297 aaKnown RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 ATP6AP1Q15904 470 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 KCNMB1Q16558 191 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 SLC36A3Q495N2 470 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 UGT2A3Q6UWM9 527 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 YTHDF3Q7Z739 585 aaKnown RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 HIPK1Q86Z02 1210 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 HS3ST5Q8IZT8 346 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 NPEPL1Q8NDH3 523 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 CPEB3Q8NE35 698 aaKnown RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 OR10H5Q8NGA6 315 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 OR2T4Q8NH00 348 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 OR5K1Q8NHB7 308 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 AKR7LQ8NHP1 331 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 DNAJC9Q8WXX5 260 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 C11orf40Q8WZ69 217 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 RAB3IPQ96QF0 476 aaPredicted RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 TEX12Q9BXU0 123 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 RACGAP1Q9H0H5 632 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 PLK3Q9H4B4 646 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 NTN4Q9HB63 628 aa13.01□□□□□ -0.33
CXCL12-207ENST00000488591 BARX1Q9HBU1 254 aaPredicted RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 EIF3KQ9UBQ5 218 aaKnown RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 MAP1AP78559 2803 aaPredicted RBP13.01□□□□□ -0.33
CXCL12-207ENST00000488591 ARID1AO14497 2285 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 IGLV1-36A0A0B4J1U3 117 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 OR6C68A6NDL8 312 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 RIIAD1A6NNX1 92 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 H7C417 338 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 MPZL1O95297 269 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 HLA-DQA2P01906 255 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 CCL2P13500 99 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 OSMP13725 252 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 PCSK6P29122 969 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 EFNB3Q15768 340 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 SWI5Q1ZZU3 235 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 ZNF774Q6NX45 483 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 SLC27A4Q6P1M0 643 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 ARL9Q6T311 187 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 ZBTB46Q86UZ6 589 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 SLC37A3Q8NCC5 494 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 OR4Q3Q8NH05 313 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 CDADC1Q9BWV3 514 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 BCL2L14Q9BZR8 327 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 WNT5BQ9H1J7 359 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 FN3KQ9H479 309 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 ZKSCAN7Q9P0L1 754 aaPredicted RBP13□□□□□ -0.33
CXCL12-207ENST00000488591 REV1Q9UBZ9 1251 aa13□□□□□ -0.33
CXCL12-207ENST00000488591 NDRG4Q9ULP0 352 aaKnown RBP13□□□□□ -0.33
CXCL12-207ENST00000488591 ITPR3Q14573 2671 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 C5orf49A4QMS7 147 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 G3V2T6 193 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 DCTN6O00399 190 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 SGCEO43556 437 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 TP53P04637 393 aaPredicted RBP12.99□□□□□ -0.33
CXCL12-207ENST00000488591 COX5BP10606 129 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 CD99P14209 185 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 ZNF3P17036 446 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 GRK5P34947 590 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 UCP2P55851 309 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 SELENOVP59797 346 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 ACTR3P61158 418 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 TEKQ02763 1124 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 MST1LQ2TV78 715 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
CXCL12-207ENST00000488591 ZDHHC13Q8IUH4 622 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 C1orf174Q8IYL3 243 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 CYB561A3Q8NBI2 242 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 WFDC11Q8NEX6 87 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 PROKR2Q8NFJ6 384 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 GJC3Q8NFK1 279 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 MRPL24Q96A35 216 aaKnown RBP12.99□□□□□ -0.33
CXCL12-207ENST00000488591 POM121L2Q96KW2 1035 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 PAPOLBQ9NRJ5 636 aaKnown RBP12.99□□□□□ -0.33
CXCL12-207ENST00000488591 ASH2LQ9UBL3 628 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 AKAP9Q99996 3911 aa12.99□□□□□ -0.33
CXCL12-207ENST00000488591 USF3Q68DE3 2245 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms