RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 GUSBP11Q6P575 273 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 PAPD4Q6PIY7 484 aaKnown RBP23.42■■□□□ 1.34
HLA-C-208ENST00000487245 DNM1P34Q6PK57 102 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 FAM198BQ6UWH4 519 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 CATSPERDQ86XM0 798 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 ATOH1Q92858 354 aaPredicted RBP23.42■■□□□ 1.34
HLA-C-208ENST00000487245 SUSD2Q9UGT4 822 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 A0A1W2PPC1 479 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 OR6C65A6NJZ3 312 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 PYCARD-AS1I3L0S3 204 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 ITGA5P08648 1049 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 MSX1P28360 303 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 CCKBRP32239 447 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 DHPSP49366 369 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-208ENST00000487245 EFNB2P52799 333 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 CCL7P80098 99 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 GLO1Q04760 184 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 OPCMLQ14982 345 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 C2orf76Q3KRA6 126 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 TOR2AQ5JU69 321 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 HDDC2Q7Z4H3 204 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 SLC38A9Q8NBW4 561 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 RNF138Q8WVD3 245 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 CCDC163A0A0D9SF12 145 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 VSTM2BA6NLU5 285 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 SULT1C2O00338 296 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 SOX1O00570 391 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-208ENST00000487245 PNPP00491 289 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 SPARCP09486 303 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 AKAIN1P0CW23 69 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 VSIG10L2P0DP72 767 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 CTLA4P16410 223 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 IGFBP3P17936 291 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-208ENST00000487245 DAP3P51398 398 aaKnown RBP23.41■■□□□ 1.34
HLA-C-208ENST00000487245 RIDAP52758 137 aaKnown RBP23.41■■□□□ 1.34
HLA-C-208ENST00000487245 FAM209AQ5JX71 171 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 ASPHD2Q6ICH7 369 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 H1FNTQ75WM6 255 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-208ENST00000487245 KRT77Q7Z794 578 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 SLC25A28Q96A46 364 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 DDIT4LQ96D03 193 aa23.41■■□□□ 1.34
HLA-C-208ENST00000487245 TRBV11-1A0A0K0K1C0 115 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 TEX51A0A1B0GUA7 166 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 TOXO94900 526 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 CYC1P08574 325 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 MELTFP08582 738 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 ADAM8P78325 824 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 TMEM225Q6GV28 225 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 SIGIRRQ6IA17 410 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 SLC35D2Q76EJ3 337 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 BIVMQ86UB2 503 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 CHIAQ9BZP6 476 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 DHDHQ9UQ10 334 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 SLC22A13Q9Y226 551 aa23.4■■□□□ 1.34
HLA-C-208ENST00000487245 ARID1BQ8NFD5 2236 aaPredicted RBP23.4■■□□□ 1.34
HLA-C-208ENST00000487245 UBE2QL1A1L167 161 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 SRSF10O75494 262 aaKnown RBP23.39■■□□□ 1.34
HLA-C-208ENST00000487245 HOXA6P31267 233 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 PRSS3P35030 304 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 ODF4Q2M2E3 257 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 GLT8D1Q68CQ7 371 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 C16orf47Q6ZP98 133 aaPredicted RBP23.39■■□□□ 1.34
HLA-C-208ENST00000487245 CPEB2Q7Z5Q1 589 aaKnown RBP23.39■■□□□ 1.34
HLA-C-208ENST00000487245 GPX8Q8TED1 209 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 ABHD6Q9BV23 337 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 POTEKPQ9BYX7 375 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 SDHAF3Q9NRP4 125 aa23.39■■□□□ 1.34
HLA-C-208ENST00000487245 PCNX3Q9H6A9 2034 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 TRAV18A0A075B6X5 111 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 LY6G6EA0A0G2JKS1 128 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 IGHV5-10-1A0A0J9YXX1 117 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 A0A1W2PQM1 296 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 MS4A18H0YCH9 400 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 M6PRP20645 277 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 EIF2B1Q14232 305 aaKnown RBP23.39■■□□□ 1.33
HLA-C-208ENST00000487245 POU4F3Q15319 338 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 MS4A18Q3C1V0 323 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 UBALD2Q8IYN6 164 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 OR52N5Q8NH56 324 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 SAP25Q8TEE9 199 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 ASB5Q8WWX0 329 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 ASB10Q8WXI3 467 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 ASB13Q8WXK3 278 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 GINS4Q9BRT9 223 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 GSX2Q9BZM3 304 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 C19orf25Q9UFG5 118 aaPredicted RBP23.39■■□□□ 1.33
HLA-C-208ENST00000487245 U3KQA8 63 aa23.39■■□□□ 1.33
HLA-C-208ENST00000487245 TMEM272A0A1B0GTI8 110 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 NPIPA5E9PKD4 350 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 ETV2O00321 342 aaPredicted RBP23.38■■□□□ 1.33
HLA-C-208ENST00000487245 ZFAND5O76080 213 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 RGS11O94810 467 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 TIAF1O95411 115 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 CFDP00746 253 aaPredicted RBP23.38■■□□□ 1.33
HLA-C-208ENST00000487245 PDGFAP04085 211 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 CD2P06729 351 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 PTGS2P35354 604 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 FOXL2P58012 376 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 RAB14P61106 215 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 MFGE8Q08431 387 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms