RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 HDAC2Q92769 488 aaKnown RBP16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 OR2H1Q9GZK4 316 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 SLITRK2Q9H156 845 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 WNT5BQ9H1J7 359 aa16.38■□□□□ 0.21
SMPDL3A-202ENST00000487215 OR7A10O76100 309 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 MT-ND1P03886 318 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 FUT1P19526 365 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 CD47Q08722 323 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 CDK5R2Q13319 367 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 SELPLGQ14242 412 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 MTX3Q5HYI7 312 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 FAM27BQ5VT28 67 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 LEG1Q6P5S2 330 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 ZNF283Q8N7M2 679 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 MOSPD2Q8NHP6 518 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 TAMM41Q96BW9 452 aa16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 MS4A7Q9GZW8 240 aaPredicted RBP16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 STX18Q9P2W9 335 aaKnown RBP16.37■□□□□ 0.21
SMPDL3A-202ENST00000487215 F5H0A9 414 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 TIMM8AO60220 97 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 VIMP08670 466 aaKnown RBP16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 MDKP21741 143 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 MTPNP58546 118 aa16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 BTG1P62324 171 aa16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 PSG7Q13046 419 aa16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 ZMYND11Q15326 602 aa16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 SLC25A47Q6Q0C1 308 aa16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 PATL1Q86TB9 770 aaKnown RBP16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 LRRC28Q86X40 367 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 SGTBQ96EQ0 304 aa16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 NANOGQ9H9S0 305 aa16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 C20orf141Q9NUB4 165 aa16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 SOX21Q9Y651 276 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3A-202ENST00000487215 TSPAN19P0C672 248 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 IGHV4-38-2P0DP08 117 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 LAP3P28838 519 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 ARHGDIAP52565 204 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 TAF11Q15544 211 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 ZNF774Q6NX45 483 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 DHDDSQ86SQ9 333 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 NKAIN4Q8IVV8 208 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 ALDH16A1Q8IZ83 802 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 TMEM255BQ8WV15 326 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 STON2Q8WXE9 905 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 ATP6V1G3Q96LB4 118 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 C4orf45Q96LM5 186 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 SAMD8Q96LT4 415 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 SIGLEC11Q96RL6 698 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 ELOVL3Q9HB03 270 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 OR5V1Q9UGF6 321 aa16.35■□□□□ 0.21
SMPDL3A-202ENST00000487215 IGHV3OR16-10A0A075B7F0 116 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 GMNCA6NCL1 334 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 NPIPB13A6NJU9 1138 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 NPIPB4C9JG80 1138 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 CST2P09228 141 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 NR2C1P13056 603 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 TNFRSF1AP19438 455 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 CD80P33681 288 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 PCGF2P35227 344 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 RBM34P42696 430 aaKnown RBP16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 MTNR1AP48039 350 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 CRYBA2P53672 197 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 PAX8Q06710 450 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 ESCO2Q56NI9 601 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 ZER1Q7Z7L7 766 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 JAZF1Q86VZ6 243 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 SLC30A8Q8IWU4 369 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 PARP8Q8N3A8 854 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 OR2Z1Q8NG97 314 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 OR52E2Q8NGJ4 325 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 SLC26A7Q8TE54 656 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 CGREF1Q99674 301 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 POFUT1Q9H488 388 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 TIMM10BQ9Y5J6 103 aa16.34■□□□□ 0.21
SMPDL3A-202ENST00000487215 CMYA5Q8N3K9 4069 aa16.33■□□□□ 0.21
SMPDL3A-202ENST00000487215 GPANK1O95872 356 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 IGF2P01344 180 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 TNFSF4P23510 183 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 TOP3AQ13472 1001 aaPredicted RBP16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 LAPTM4AQ15012 233 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 Q6ZR03 302 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 C9orf139Q6ZV77 190 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 CLDN22Q8N7P3 220 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 TMEM239Q8WW34 195 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 ITLN1Q8WWA0 313 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 LIPHQ8WWY8 451 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 TMIGD2Q96BF3 282 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 ALG12Q9BV10 488 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 TXNIPQ9H3M7 391 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 KAT8Q9H7Z6 458 aaKnown RBP16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 NDUFAF1Q9Y375 327 aa16.33■□□□□ 0.2
SMPDL3A-202ENST00000487215 A0A0G2JK05 382 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 CEACAM18A8MTB9 384 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 ANGPT2O15123 496 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 ABHD16AO95870 558 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 OMGP23515 440 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 MDH2P40926 338 aaKnown RBP16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 TAS2R41P59536 307 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 PCBD1P61457 104 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms