RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 IMPA2O14732 288 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 F10P00742 488 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 CD22P20273 847 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 BAXQ07812 192 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 TMEM217Q8N7C4 229 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 GOT1L1Q8NHS2 421 aaPredicted RBP15.02□□□□□ -0.01
COL7A1-210ENST00000487017 PCYT1BQ9Y5K3 369 aaPredicted RBP15.02□□□□□ -0.01
COL7A1-210ENST00000487017 NXPH3O95157 252 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 CLDN1O95832 211 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 SLC2A1P11166 492 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 HOXA1P49639 335 aaPredicted RBP15.02□□□□□ -0.01
COL7A1-210ENST00000487017 EGR3Q06889 387 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 ZNF813Q6ZN06 617 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 FAM71CQ8NEG0 241 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 OR1S2Q8NGQ3 325 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 SLC25A43Q8WUT9 341 aaPredicted RBP15.02□□□□□ -0.01
COL7A1-210ENST00000487017 NKX6-2Q9C056 277 aaPredicted RBP15.02□□□□□ -0.01
COL7A1-210ENST00000487017 COL16A1Q07092 1604 aaPredicted RBP15.02□□□□□ -0.01
COL7A1-210ENST00000487017 A0A087WV62 115 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 ATP6V1G2-DDX39BF2Z307 99 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 SCGB1D1O95968 90 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 PRSS36Q5K4E3 855 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 DCAF12Q5T6F0 453 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 DPPA2Q7Z7J5 298 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 GRAMD2AQ8IUY3 354 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 BAHD1Q8TBE0 780 aaPredicted RBP15.02□□□□□ -0.01
COL7A1-210ENST00000487017 BCL7CQ8WUZ0 217 aaPredicted RBP15.02□□□□□ -0.01
COL7A1-210ENST00000487017 CHRNA9Q9UGM1 479 aa15.02□□□□□ -0.01
COL7A1-210ENST00000487017 AADACP22760 399 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 TMEM81Q6P7N7 255 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 KCNRGQ8N5I3 272 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 LINC00615Q96LM1 132 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-210ENST00000487017 MGST1P10620 155 aaKnown RBP15.01□□□□□ -0.01
COL7A1-210ENST00000487017 HSF1Q00613 529 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 CA13Q8N1Q1 262 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 UQCC2Q9BRT2 126 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 UTP23Q9BRU9 249 aaKnown RBP15.01□□□□□ -0.01
COL7A1-210ENST00000487017 ISG20L2Q9H9L3 353 aaKnown RBP15.01□□□□□ -0.01
COL7A1-210ENST00000487017 CHST11Q9NPF2 352 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 CSAG2Q9Y5P2 127 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 MN1Q10571 1320 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-210ENST00000487017 HTRA3P83110 453 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 ACKR1Q16570 336 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 CCDC190Q86UF4 302 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 OR6K3Q8NGY3 331 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 LAT2Q9GZY6 243 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 HIPK2Q9H2X6 1198 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 NUDT19A8MXV4 375 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 SPNP16150 400 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 PRTGQ2VWP7 1150 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 H3F3CQ6NXT2 135 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 ARIH2OSQ8N7S6 290 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 LIPHQ8WWY8 451 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 SLC25A32Q9H2D1 315 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 TAS2R5Q9NYW4 299 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 GHRLQ9UBU3 117 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 PURGQ9UJV8 347 aaKnown RBP15.01□□□□□ -0.01
COL7A1-210ENST00000487017 SSC5DA1L4H1 1573 aa15.01□□□□□ -0.01
COL7A1-210ENST00000487017 A0A1B0GUH1 482 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 HSPB2A8KAH6 182 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 H0Y8X5 98 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 MAGEB4O15481 346 aaPredicted RBP15□□□□□ -0.01
COL7A1-210ENST00000487017 F2RL1P55085 397 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 HSPB2Q16082 182 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 SEMA6DQ8NFY4 1073 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 CALHM2Q9HA72 323 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 CYB5BO43169 146 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 NPBWR1P48145 328 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 OR1D5P58170 312 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 XAF1Q6GPH4 301 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 OR51A4Q8NGJ6 313 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 OR1J2Q8NGS2 313 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 MOB1AQ9H8S9 216 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 SLC6A13Q9NSD5 602 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 FLVCR2Q9UPI3 526 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 NUMA1Q14980 2115 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 A0A0B4J203 849 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 HRO43593 1189 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 RPA2P15927 270 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 GZMKP49863 264 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 RPL18Q07020 188 aaKnown RBP15□□□□□ -0.01
COL7A1-210ENST00000487017 SLC10A1Q14973 349 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 ACOT7LQ6ZUV0 252 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 ZNF439Q8NDP4 499 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 SLAMF6Q96DU3 332 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 DOCK2Q92608 1830 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 ZNF587BE7ETH6 402 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 TIMM8AO60220 97 aaPredicted RBP15□□□□□ -0.01
COL7A1-210ENST00000487017 B4GALNT1Q00973 533 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 GLCCI1Q86VQ1 547 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 MUCL1Q96DR8 90 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 TPPP3Q9BW30 176 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 SEMA4CQ9C0C4 833 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 SLC22A11Q9NSA0 550 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 KPTNQ9Y664 436 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 MYH14Q7Z406 1995 aaKnown RBP15□□□□□ -0.01
COL7A1-210ENST00000487017 H0Y8G0 127 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 RAB27BO00194 218 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 CD1EP15812 388 aa15□□□□□ -0.01
COL7A1-210ENST00000487017 SUMF1Q8NBK3 374 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms