RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 XKRXQ6PP77 449 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 BHLHA15Q7RTS1 189 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-229ENST00000486665 TIGD4Q8IY51 512 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 LRRC18Q8N456 261 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 WDR31Q8NA23 367 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 BPIFB6Q8NFQ5 453 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 RFKQ969G6 155 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 RNFT2Q96EX2 444 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF416Q9BWM5 594 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 MARCH7Q9H992 704 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 KCNJ16Q9NPI9 418 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 WARS2Q9UGM6 360 aaKnown RBP11.18□□□□□ -0.62
HDAC6-229ENST00000486665 ITPR3Q14573 2671 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF503-AS2A6NEH8 195 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 SLC22A31A6NKX4 558 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF593O00488 134 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 XPNPEP2O43895 674 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 CLDN14O95500 239 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 DBTP11182 482 aaKnown RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 PSMB1P20618 241 aaKnown RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 MSR1P21757 451 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 NAA10P41227 235 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 RPS27P42677 84 aaKnown RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 GUCA1AP43080 201 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 MTNR1AP48039 350 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 BLVRAP53004 296 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 SH3BGRP55822 239 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 TUBA1BP68363 451 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 TUBA4AP68366 448 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 TGFBR3Q03167 851 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 TFF3Q07654 80 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 TMED1Q13445 227 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 MED21Q13503 144 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 GGTLC2Q14390 218 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 TBRG1Q3YBR2 411 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 LCN1P1Q5VSP4 162 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 FAM27BQ5VT28 67 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 KRT80Q6KB66 452 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 C22orf34Q6ZV56 151 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 TUBA1AQ71U36 451 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 SHFQ7M4L6 423 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 ERI1Q8IV48 349 aaKnown RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 OR4F15Q8NGB8 312 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 OR51G2Q8NGK0 314 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 GGHQ92820 318 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 RNASE6Q93091 150 aaKnown RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 LGALS12Q96DT0 336 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 FBXO17Q96EF6 278 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 BOD1Q96IK1 185 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 RHNO1Q9BSD3 238 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 ADGRL4Q9HBW9 690 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 PLCXD1Q9NUJ7 323 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 HAO2Q9NYQ3 351 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF224Q9NZL3 707 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 RPL36Q9Y3U8 105 aaKnown RBP11.17□□□□□ -0.62
HDAC6-229ENST00000486665 COMMD3-BMI1R4GMX3 469 aa11.17□□□□□ -0.62
HDAC6-229ENST00000486665 A0A1W2PR80 420 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 C16orf97H3BN30 126 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 J3QRE1 110 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 HLA-HP01893 362 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 HRGP04196 525 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 ADRA2AP08913 450 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 CST2P09228 141 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 SBK2P0C263 348 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 OR8G3PP0DMU2 310 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF823P16415 610 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 IL32P24001 234 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 CCKARP32238 428 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 UGT2B10P36537 528 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 SLC15A1P46059 708 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 ENTPD1P49961 510 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 LSM6P62312 80 aaKnown RBP11.16□□□□□ -0.62
HDAC6-229ENST00000486665 PCK2Q16822 640 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 NRN1LQ496H8 165 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 CORO6Q6QEF8 472 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 LINC00346Q8IVM7 164 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 ACBD4Q8NC06 268 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 C1orf162Q8NEQ5 155 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-229ENST00000486665 OR10H5Q8NGA6 315 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 S100PBPQ96BU1 408 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 INTS14Q96SY0 518 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 HDHD5Q9BXW7 423 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 SLC17A5Q9NRA2 495 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 MRPS18AQ9NVS2 196 aaKnown RBP11.16□□□□□ -0.62
HDAC6-229ENST00000486665 EXOGQ9Y2C4 368 aaKnown RBP11.16□□□□□ -0.62
HDAC6-229ENST00000486665 LHFPL6Q9Y693 200 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 HCFC1P51610 2035 aa11.16□□□□□ -0.62
HDAC6-229ENST00000486665 SPG11Q96JI7 2443 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 SNTNA6NMZ2 147 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 SLC1A7O00341 560 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 FAM20BO75063 409 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 FARS2O95363 451 aaKnown RBP11.15□□□□□ -0.62
HDAC6-229ENST00000486665 MMP7P09237 267 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-229ENST00000486665 SPARCP09486 303 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 CXCR4P61073 352 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 ADAM8P78325 824 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 PIGFQ07326 219 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 SNTB1Q13884 538 aaKnown RBP11.15□□□□□ -0.62
HDAC6-229ENST00000486665 TEX30Q5JUR7 227 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms