RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 STX2P32856 288 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 TGFBR2P37173 567 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 ERFP50548 548 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 RPS13P62277 151 aaKnown RBP6□□□□□ -1.45
HDAC3-209ENST00000486618 RPS4XP62701 263 aaKnown RBP6□□□□□ -1.45
HDAC3-209ENST00000486618 IRF8Q02556 426 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 FGL1Q08830 312 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 FUT7Q11130 342 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 RIN1Q13671 783 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 NPTX1Q15818 432 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 TEDDM1Q5T9Z0 273 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 GPR107Q5VW38 600 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 LIPJQ5W064 366 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 OR4C11Q6IEV9 310 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 SH2D5Q6ZV89 423 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 C16orf62Q7Z3J2 963 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 PIGWQ7Z7B1 504 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 IFNEQ86WN2 208 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 FAM90A1Q86YD7 464 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 NECAP1Q8NC96 275 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 SLC37A3Q8NCC5 494 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 OR4D6Q8NGJ1 314 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 OR51L1Q8NGJ5 315 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 RHEBL1Q8TAI7 183 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 DOK4Q8TEW6 326 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 IGFBPL1Q8WX77 278 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 HSD17B8Q92506 261 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 AKAP1Q92667 903 aaKnown RBP eCLIP6□□□□□ -1.45
HDAC3-209ENST00000486618 CPNE4Q96A23 557 aaPredicted RBP6□□□□□ -1.45
HDAC3-209ENST00000486618 STARD4Q96DR4 205 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 CMTM7Q96FZ5 175 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 MARK4Q96L34 752 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 C3orf30Q96M34 536 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 SIGLEC11Q96RL6 698 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 COPS4Q9BT78 406 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 DUSP26Q9BV47 211 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 OSBPL11Q9BXB4 747 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 HOXD1Q9GZZ0 328 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 ALX4Q9H161 411 aaPredicted RBP6□□□□□ -1.45
HDAC3-209ENST00000486618 SLC38A1Q9H2H9 487 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 MANSC1Q9H8J5 431 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 ANKZF1Q9H8Y5 726 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 ZC4H2Q9NQZ6 224 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 IKZF3Q9UKT9 509 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 EXO1Q9UQ84 846 aaKnown RBP6□□□□□ -1.45
HDAC3-209ENST00000486618 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 SMCO3A2RU48 225 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 FRG2CA6NGY1 282 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 SLC22A20A6NK97 555 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ANKRD30BLA7E2S9 258 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 NPIPA7E9PJI5 369 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 FOXE1O00358 373 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 CCSO14618 274 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 EMC8O43402 210 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ICOSLGO75144 302 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 SH3BGRLO75368 114 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 SERPINB7O75635 380 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 NPIPA8P0DM63 369 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 PSKH1P11801 424 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF708P17019 499 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 LOXP28300 417 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 SRD5A2P31213 254 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 TIA1P31483 386 aaKnown RBP eCLIP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 FCGR2BP31994 310 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 THBS2P35442 1172 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 RASSF2P50749 326 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 PGGT1BP53609 377 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 EEFSECP57772 596 aaKnown RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 OR2B6P58173 313 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 MXRA7P84157 204 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 EFNB1P98172 346 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 PITPNAQ00169 270 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ITGADQ13349 1161 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 HLXQ14774 488 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 TSNQ15631 228 aaKnown RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 CHI3L2Q15782 390 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 CARTPTQ16568 116 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 TATDN3Q17R31 274 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 KLHL12Q53G59 568 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 AKIRIN2Q53H80 203 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 UBAP2Q5T6F2 1119 aaKnown RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 HACD4Q5VWC8 232 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ADNP2Q6IQ32 1131 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 MED27Q6P2C8 311 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 VWA1Q6PCB0 445 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF474Q6S9Z5 364 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 C5orf46Q6UWT4 87 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF550Q7Z398 422 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 PTGR2Q8N8N7 351 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 MAPK1IP1LQ8NDC0 245 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 OR10S1Q8NGN2 331 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 RDH11Q8TC12 318 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ABHD5Q8WTS1 349 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 AP3S1Q92572 193 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 CTHRC1Q96CG8 243 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ZBED6CLQ96FA7 236 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 ELMOD3Q96FG2 381 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 PACRGQ96M98 296 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-209ENST00000486618 SFXN2Q96NB2 322 aa5.99□□□□□ -1.45
HDAC3-209ENST00000486618 NAPGQ99747 312 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms