RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 RNASEH2CQ8TDP1 164 aaKnown RBP3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 AGAP11Q8TF27 550 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 ASB17Q8WXJ9 295 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 PIK3R3Q92569 461 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 ATOH1Q92858 354 aaPredicted RBP3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 RNF183Q96D59 192 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 BPIFA2Q96DR5 249 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 WDR34Q96EX3 536 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 PELI1Q96FA3 418 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 WBP1Q96G27 269 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 SDSLQ96GA7 329 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 CENPNQ96H22 339 aaPredicted RBP3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 BTF3L4Q96K17 158 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 PRMT6Q96LA8 375 aaPredicted RBP3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 AGAP4Q96P64 663 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 OR2M2Q96R28 347 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 ZNF347Q96SE7 839 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 MBOAT4Q96T53 435 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 VPS25Q9BRG1 176 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 HDHD5Q9BXW7 423 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 SLC39A8Q9C0K1 460 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 TMEM39BQ9GZU3 492 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 LHPPQ9H008 270 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 ANKRD19PQ9H560 264 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 ARMC7Q9H6L4 198 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 TLE6Q9H808 572 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 MAP6D1Q9H9H5 199 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 MIEF1Q9NQG6 463 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 GLTPQ9NZD2 209 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 C1RLQ9NZP8 487 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 LHX3Q9UBR4 397 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 ZNF221Q9UK13 617 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 MYH3P11055 1940 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 AKAP11Q9UKA4 1901 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 WRNQ14191 1432 aaPredicted RBP eCLIP3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 TP53BP1Q12888 1972 aaPredicted RBP3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 ATP10AO60312 1499 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 RAPGEF2Q9Y4G8 1499 aa3.67□□□□□ -1.82
R3HDM1-217ENST00000486532 LTBP4Q8N2S1 1624 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 CLASP1Q7Z460 1538 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 TRAV24A0A0B4J272 114 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 ZNF816-ZNF321PA0A0X1KG74 233 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 PRSS37A4D1T9 235 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 TMEM8BA6NDV4 472 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 ARL5CA6NH57 179 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 SLC22A20A6NK97 555 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 CYSRT1A8MQ03 144 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 C21orf140B9A014 251 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 TRAPPC2LH3BP13 241 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 H7C2Y5 167 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 MSI1O43347 362 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 RGS14O43566 566 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 OR2J2O76002 312 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 ZNF432O94892 652 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 TNFSF15O95150 251 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 TDP2O95551 362 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 TTC4O95801 387 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 IGHG4P01861 327 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 BPGMP07738 259 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 CT45A8P0DMV1 189 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 CT45A9P0DMV2 189 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 HIST1H1EP10412 219 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 FOLR1P15328 257 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 KITLGP21583 273 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 PSMA1P25786 263 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 MARK3P27448 753 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 ADORA1P30542 326 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 AKR1C3P42330 323 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 RPL35P42766 123 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 RPL21P46778 160 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 RAG2P55895 527 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 KLF3P57682 345 aaPredicted RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 DNAJB13P59910 316 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 SEC61A1P61619 476 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 SNRPEP62304 92 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 IL5RAQ01344 420 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 C2orf80Q0P641 193 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 Q0VFX4 171 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 ELAVL2Q12926 359 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 MELKQ14680 651 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 UPP1Q16831 310 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 ZNF630Q2M218 657 aaPredicted RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 ARHGAP11BQ3KRB8 267 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 LIN52Q52LA3 116 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 HSD17B12Q53GQ0 312 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 CT45A2Q5DJT8 189 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 TCTEX1D4Q5JR98 221 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 LYPLAL1Q5VWZ2 237 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 FAM166AQ6J272 317 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 PNCKQ6P2M8 343 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 LCTLQ6UWM7 567 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 LCLAT1Q6UWP7 414 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 MON1BQ7L1V2 547 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 OLIG3Q7RTU3 272 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 NUFIP2Q7Z417 695 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 MOB3BQ86TA1 216 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 THOC6Q86W42 341 aaKnown RBP3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 TMEM25Q86YD3 366 aa3.66□□□□□ -1.82
R3HDM1-217ENST00000486532 GCSAMQ8N6F7 178 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms