RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZHX1-C8orf76Q96EF9 292 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 DCUN1D5Q9BTE7 237 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 PLGRKTQ9HBL7 147 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 NRIP3Q9NQ35 241 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 NDUFB11Q9NX14 153 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 PRSS50Q9UI38 385 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 OSGIN1Q9UJX0 560 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ING1Q9UK53 422 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 GPR52Q9Y2T5 361 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 CAB39Q9Y376 341 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 EMC9Q9Y3B6 208 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 ARID1AO14497 2285 aa8.27□□□□□ -1.09
TMEM39A-208ENST00000486159 A0A087WZY1 265 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 J3QRE1 110 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF208O43345 1280 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 AKAP8O43823 692 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 PPP1R3DO95685 299 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 NUDT14O95848 222 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SOD3P08294 240 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 CD14P08571 375 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 HSMCR30P0CW71 290 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 GAAP10253 952 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF182P17025 639 aaPredicted RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SLC2A5P22732 501 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 GADD45AP24522 165 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 RPL4P36578 427 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 CDKN1AP38936 164 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 APOBEC1P41238 236 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 CENPAP49450 140 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF41P51814 821 aaPredicted RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SLC25A1P53007 311 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 TAS2R43P59537 309 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 TNK1Q13470 666 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 AQP6Q13520 282 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 DCTN2Q13561 401 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 GGTLC2Q14390 218 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SPCS2Q15005 226 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 QPRTQ15274 297 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF239Q16600 458 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 TSTQ16762 297 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SLC25A53Q5H9E4 307 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 BEX5Q5H9J7 111 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF362Q5T0B9 420 aaPredicted RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 PLBD1Q6P4A8 553 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SEZ6L2Q6UXD5 910 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 TFAP2EQ6VUC0 442 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 ESPNLQ6ZVH7 1005 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 GABRG1Q8N1C3 465 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SLC37A3Q8NCC5 494 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 TBC1D15Q8TC07 691 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 DYNC2LI1Q8TCX1 351 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 HAVCR2Q8TDQ0 301 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 PTP4A1Q93096 173 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 ZBTB8AQ96BR9 441 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 DTNBP1Q96EV8 351 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 KLHL15Q96M94 604 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 OPALINQ96PE5 141 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 ERMAPQ96PL5 475 aaPredicted RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 OR5M11Q96RB7 305 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SNX18Q96RF0 628 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 TEAD3Q99594 435 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 TMEM204Q9BSN7 226 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 GSX2Q9BZM3 304 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 MMP27Q9H306 513 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 PALMDQ9NP74 551 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 CCDC59Q9P031 241 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 MCTS1Q9ULC4 181 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 STUB1Q9UNE7 303 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 SSR3Q9UNL2 185 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 MOKQ9UQ07 419 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 LAMP3Q9UQV4 416 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 NOX1Q9Y5S8 564 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 USF3Q68DE3 2245 aa8.26□□□□□ -1.09
TMEM39A-208ENST00000486159 CUBNO60494 3623 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 CSPG4Q6UVK1 2322 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 TMED7-TICAM2A0A0A6YYA0 188 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 DPRXA6NFQ7 191 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 HS3ST1O14792 307 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 RAMP1O60894 148 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 NPIPB7O75200 414 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 BGLAPP02818 100 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 LIMS3P0CW19 117 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 LIMS4P0CW20 117 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 FCGR2AP12318 317 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 PRKCAP17252 672 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 SDHAP31040 664 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 SOX6P35712 828 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 ETV1P50549 477 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 FOXG1P55316 489 aaPredicted RBP8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 VBP1P61758 197 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 HSF2Q03933 536 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 EGR4Q05215 589 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 GALEQ14376 348 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 TRAM1Q15629 374 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 TAB1Q15750 504 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF829Q3KNS6 432 aaPredicted RBP8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 ALG10Q5BKT4 473 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 FAM69AQ5T7M9 428 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 PRSS57Q6UWY2 283 aa8.25□□□□□ -1.09
TMEM39A-208ENST00000486159 C20orf204Q6ZNR8 217 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms