RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 BDH1Q02338 343 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 EGR3Q06889 387 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 KCNMB1Q16558 191 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 ACSF3Q4G176 576 aaPredicted RBP12.72□□□□□ -0.37
COL9A1-207ENST00000486080 KRTCAP3Q53RY4 240 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 FOXL2NBQ6ZUU3 175 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 GCNT2Q8N0V5 402 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 YIPF7Q8N8F6 280 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
COL9A1-207ENST00000486080 MRPL48Q96GC5 212 aaKnown RBP12.72□□□□□ -0.37
COL9A1-207ENST00000486080 TM9SF2Q99805 663 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 TTYH2Q9BSA4 534 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 ZNF416Q9BWM5 594 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 SLCO5A1Q9H2Y9 848 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 C12orf49Q9H741 205 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 ST6GALNAC2Q9UJ37 374 aa12.72□□□□□ -0.37
COL9A1-207ENST00000486080 SF3B6Q9Y3B4 125 aaKnown RBP12.72□□□□□ -0.37
COL9A1-207ENST00000486080 PKD1L2Q7Z442 2459 aa12.71□□□□□ -0.37
COL9A1-207ENST00000486080 ZGRF1Q86YA3 2104 aa12.71□□□□□ -0.37
COL9A1-207ENST00000486080 AHRRA9YTQ3 701 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 KRT8P05787 483 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 CRYBB2P43320 205 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 ATRXP46100 2492 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 ZNF84P51523 738 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 TDGF1P3P51864 188 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 GBX2P52951 348 aaPredicted RBP12.71□□□□□ -0.38
COL9A1-207ENST00000486080 SIRPAP78324 504 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 ROR2Q01974 943 aaKnown RBP12.71□□□□□ -0.38
COL9A1-207ENST00000486080 SPCS2Q15005 226 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 RIPPLY2Q5TAB7 128 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 LIPNQ5VXI9 398 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 ARL9Q6T311 187 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 LRRC18Q8N456 261 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 TEX19Q8NA77 164 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 C9orf106Q8NAJ2 232 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 OR52N5Q8NH56 324 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 CPT1CQ8TCG5 803 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 ASB17Q8WXJ9 295 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 HSD17B8Q92506 261 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 SNRNP40Q96DI7 357 aaKnown RBP12.71□□□□□ -0.38
COL9A1-207ENST00000486080 TRMT61AQ96FX7 289 aaKnown RBP12.71□□□□□ -0.38
COL9A1-207ENST00000486080 MAP6Q96JE9 813 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 OR8B4Q96RC9 309 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 CENPOQ9BU64 300 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 TMED9Q9BVK6 235 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 NELFAQ9H3P2 528 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 B3GAT2Q9NPZ5 323 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 ASH2LQ9UBL3 628 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 POLR1DQ9Y2S0 133 aa12.71□□□□□ -0.38
COL9A1-207ENST00000486080 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 SULT1C4O75897 302 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 KRT33AO76009 404 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 TPOP07202 933 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 MSR1P21757 451 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 ENDOGQ14249 297 aaKnown RBP12.7□□□□□ -0.38
COL9A1-207ENST00000486080 CFAP77Q6ZQR2 320 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 FAM220AQ7Z4H9 259 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 KCTD20Q7Z5Y7 419 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 ZNF100Q8IYN0 542 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 OR10S1Q8NGN2 331 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 NDNFQ8TB73 568 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 APH1AQ96BI3 265 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 GMPPAQ96IJ6 420 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-207ENST00000486080 DCLRE1CQ96SD1 692 aaKnown RBP12.7□□□□□ -0.38
COL9A1-207ENST00000486080 LINC00470Q9BZP3 86 aa12.7□□□□□ -0.38
COL9A1-207ENST00000486080 GDF2Q9UK05 429 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-207ENST00000486080 A0A1W2PPW3 197 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 TRIM64BA6NI03 449 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 OGG1O15527 345 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 TMCC2O75069 709 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 SS18L1O75177 396 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 TACSTD2P09758 323 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 B4GALT1P15291 398 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 PSMA1P25786 263 aaKnown RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 GUCA1AP43080 201 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 FOXG1P55316 489 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 NANOS3P60323 173 aaKnown RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 MRPS34P82930 218 aaKnown RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 ROM1Q03395 351 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 SLC3A1Q07837 685 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 C9orf135Q5VTT2 229 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 DMKNQ6E0U4 476 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 OR7E24Q6IFN5 339 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 KCTD18Q6PI47 426 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 KRT77Q7Z794 578 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 ZNF679Q8IYX0 411 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 WNT2BQ93097 391 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 DCUN1D5Q9BTE7 237 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 GP6Q9HCN6 339 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 CENPMQ9NSP4 180 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 ASF1BQ9NVP2 202 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 TMEM38BQ9NVV0 291 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 PRSS50Q9UI38 385 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 STUB1Q9UNE7 303 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 RP1L1Q8IWN7 2480 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-207ENST00000486080 NBEAQ8NFP9 2946 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 EPG5Q9HCE0 2579 aa12.69□□□□□ -0.38
COL9A1-207ENST00000486080 RER1O15258 196 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms