RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 FBXO17Q96EF6 278 aa15.37■□□□□ 0.05
CHMP3-207ENST00000485465 USB1Q9BQ65 265 aaKnown RBP15.37■□□□□ 0.05
CHMP3-207ENST00000485465 WACQ9BTA9 647 aa15.37■□□□□ 0.05
CHMP3-207ENST00000485465 YIPF3Q9GZM5 350 aa15.37■□□□□ 0.05
CHMP3-207ENST00000485465 ACTR6Q9GZN1 396 aa15.37■□□□□ 0.05
CHMP3-207ENST00000485465 ZNF224Q9NZL3 707 aa15.37■□□□□ 0.05
CHMP3-207ENST00000485465 CYB5R1Q9UHQ9 305 aa15.37■□□□□ 0.05
CHMP3-207ENST00000485465 EXOGQ9Y2C4 368 aaKnown RBP15.37■□□□□ 0.05
CHMP3-207ENST00000485465 POLR1DQ9Y2S0 133 aa15.37■□□□□ 0.05
CHMP3-207ENST00000485465 LHFPL6Q9Y693 200 aa15.37■□□□□ 0.05
CHMP3-207ENST00000485465 TMCC2O75069 709 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 HLA-HP01893 362 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 SPARCP09486 303 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 CCDC159P0C7I6 412 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 PATE4P0C8F1 98 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 HOXC12P31275 282 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 RPS27P42677 84 aaKnown RBP15.36■□□□□ 0.05
CHMP3-207ENST00000485465 CAPZA2P47755 286 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 UBE2NP61088 152 aaKnown RBP15.36■□□□□ 0.05
CHMP3-207ENST00000485465 PCBD1P61457 104 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 RAB40BQ12829 278 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 AQP6Q13520 282 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 SLC36A2Q495M3 483 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 RBM48Q5RL73 367 aaKnown RBP15.36■□□□□ 0.05
CHMP3-207ENST00000485465 TIMM23BQ5SRD1 257 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 SHFQ7M4L6 423 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 DPPA2Q7Z7J5 298 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 SYT9Q86SS6 491 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 OR4F15Q8NGB8 312 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 SMAP2Q8WU79 429 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-207ENST00000485465 NANOS1Q8WY41 292 aaKnown RBP15.36■□□□□ 0.05
CHMP3-207ENST00000485465 OBP2BQ9NPH6 170 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 SCN3BQ9NY72 215 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 B3GNT2Q9NY97 397 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 ASH2LQ9UBL3 628 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 PSORS1C1Q9UIG5 152 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 LRCH1Q9Y2L9 728 aa15.36■□□□□ 0.05
CHMP3-207ENST00000485465 UBR5O95071 2799 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-207ENST00000485465 CLEC18AA5D8T8 446 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 ZNF503-AS2A6NEH8 195 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 EFCAB10A6NFE3 127 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 J3QRE1 110 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 UBL3O95164 117 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 MMP7P09237 267 aaPredicted RBP15.35■□□□□ 0.05
CHMP3-207ENST00000485465 RNF224P0DH78 156 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 CD79AP11912 226 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 GRNP28799 593 aaKnown RBP15.35■□□□□ 0.05
CHMP3-207ENST00000485465 HCCSP53701 268 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 TUBA1BP68363 451 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 TUBA4AP68366 448 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 C1QTNF12Q5T7M4 302 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 SLC18B1Q6NT16 456 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 CORO6Q6QEF8 472 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 CLEC18BQ6UXF7 455 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 TUBA1AQ71U36 451 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 DPY19L4Q7Z388 723 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 CDC20BQ86Y33 519 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 LINC00346Q8IVM7 164 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 SLC35F2Q8IXU6 374 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 CLEC18CQ8NCF0 446 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 OR52I1Q8NGK6 324 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 OR2AJ1Q8NGZ0 328 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 OR52N5Q8NH56 324 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 SSC4DQ8WTU2 575 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 RHNO1Q9BSD3 238 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 RNF121Q9H920 327 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 CCNB1IP1Q9NPC3 277 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 CNOT2Q9NZN8 540 aaKnown RBP15.35■□□□□ 0.05
CHMP3-207ENST00000485465 AMDHD2Q9Y303 409 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 PCDHGB1Q9Y5G3 927 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 TIMM10BQ9Y5J6 103 aa15.35■□□□□ 0.05
CHMP3-207ENST00000485465 A0A1W2PR80 420 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 IRGMA1A4Y4 181 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 FADS2O95864 444 aaKnown RBP15.34■□□□□ 0.05
CHMP3-207ENST00000485465 WNT11O96014 354 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 OR2T7P0C7T2 308 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 PIPP12273 146 aaPredicted RBP15.34■□□□□ 0.05
CHMP3-207ENST00000485465 PPP3CBP16298 524 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 ZNF32P17041 273 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 CRHBPP24387 322 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 ARR3P36575 388 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 HIST1H3AP68431 136 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 SORDQ00796 357 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 PIGFQ07326 219 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 HIST2H3PS2Q5TEC6 136 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 TMEM53Q6P2H8 277 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 HIST2H3AQ71DI3 136 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 ZNF454Q8N9F8 522 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 ZNF540Q8NDQ6 660 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 GJC3Q8NFK1 279 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 OR2T27Q8NH04 317 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 OTOSQ8NHW6 89 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 HSD17B8Q92506 261 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 MNTQ99583 582 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 YTHDF1Q9BYJ9 559 aaKnown RBP15.34■□□□□ 0.05
CHMP3-207ENST00000485465 FGF20Q9NP95 211 aaPredicted RBP15.34■□□□□ 0.05
CHMP3-207ENST00000485465 NPDC1Q9NQX5 325 aaPredicted RBP15.34■□□□□ 0.05
CHMP3-207ENST00000485465 FKBP14Q9NWM8 211 aa15.34■□□□□ 0.05
CHMP3-207ENST00000485465 GDF2Q9UK05 429 aaPredicted RBP15.34■□□□□ 0.05
CHMP3-207ENST00000485465 TPRKBQ9Y3C4 175 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms