RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 VMACQ2NL98 169 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 PABPC1L2AQ5JQF8 200 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 C8orf82Q6P1X6 216 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-227ENST00000485102 RBMS3Q6XE24 437 aaKnown RBP11.02□□□□□ -0.65
HDAC6-227ENST00000485102 CCDC121Q6ZUS5 278 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF101Q8IZC7 436 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 DEFB108BQ8NET1 73 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 NOXO1Q8NFA2 376 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 KLF14Q8TD94 323 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-227ENST00000485102 SLC26A7Q8TE54 656 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 LIPHQ8WWY8 451 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 CCL17Q92583 94 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 GTF3AQ92664 365 aaKnown RBP11.02□□□□□ -0.65
HDAC6-227ENST00000485102 NMD3Q96D46 503 aaKnown RBP11.02□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF347Q96SE7 839 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 KCNN2Q9H2S1 579 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 OR51B6Q9H340 312 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 ARL8BQ9NVJ2 186 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 PLEK2Q9NYT0 353 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 ADA2Q9NZK5 511 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 STX18Q9P2W9 335 aaKnown RBP11.02□□□□□ -0.65
HDAC6-227ENST00000485102 EIF3KQ9UBQ5 218 aaKnown RBP11.02□□□□□ -0.65
HDAC6-227ENST00000485102 ZDHHC8Q9ULC8 765 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 DOCK11Q5JSL3 2073 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 WNK1Q9H4A3 2382 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 PLSCR5A0PG75 271 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 CPSF4LA6NMK7 179 aaKnown RBP11.01□□□□□ -0.65
HDAC6-227ENST00000485102 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 CLDN34H7C241 214 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 FXYD1O00168 92 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 GYG2O15488 501 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 TRMUO75648 421 aaKnown RBP11.01□□□□□ -0.65
HDAC6-227ENST00000485102 ACADSP16219 412 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 MAKP20794 623 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 ZFP36P26651 326 aaKnown RBP11.01□□□□□ -0.65
HDAC6-227ENST00000485102 GCH1P30793 250 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 IFNA8P32881 189 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 WNT5AP41221 380 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 SLC7A2P52569 658 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 UGT2B15P54855 530 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 HSF2Q03933 536 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 MTX3Q5HYI7 312 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 TMEM255AQ5JRV8 349 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 THEM4Q5T1C6 240 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 ARMC4Q5T2S8 1044 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 FAM27BQ5VT28 67 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 CCDC80Q76M96 950 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 NANOGNBQ7Z5D8 188 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 TSPYL5Q86VY4 417 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-227ENST00000485102 SLC15A3Q8IY34 581 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 OR4D11Q8NGI4 311 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 ST7LQ8TDW4 575 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 ASB10Q8WXI3 467 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 NABP1Q96AH0 204 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 KCTD14Q9BQ13 255 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-227ENST00000485102 PRSS27Q9BQR3 290 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 MEPEQ9NQ76 525 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-227ENST00000485102 MAGEL2Q9UJ55 1249 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 PURGQ9UJV8 347 aaKnown RBP11.01□□□□□ -0.65
HDAC6-227ENST00000485102 NUP50Q9UKX7 468 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 BAG5Q9UL15 447 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 UGT2A1Q9Y4X1 527 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 PPIAL4AQ9Y536 164 aa11.01□□□□□ -0.65
HDAC6-227ENST00000485102 LOC100509620A0A075B734 347 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 A0A1W2PRG6 482 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 ZSCAN5BA6NJL1 495 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 BLOC1S5-TXNDC5H3BN57 136 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 SPRY3O43610 288 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 IGHV2-70P01814 119 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 MT-ND1P03886 318 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 HSD17B1P14061 328 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF32P17041 273 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 TUBG1P23258 451 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 CPT2P23786 658 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 MPV17P39210 176 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 DAP3P51398 398 aaKnown RBP11□□□□□ -0.65
HDAC6-227ENST00000485102 LCN2P80188 198 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 LIPEQ05469 1076 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 RPL18Q07020 188 aaKnown RBP11□□□□□ -0.65
HDAC6-227ENST00000485102 BNIP1Q12981 228 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 OCLNQ16625 522 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 TMEM155Q4W5P6 130 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 ZMAT1Q5H9K5 638 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 CALHM3Q86XJ0 350 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 RBM45Q8IUH3 476 aaKnown RBP11□□□□□ -0.65
HDAC6-227ENST00000485102 C10orf67Q8IYJ2 551 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 MICU2Q8IYU8 434 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 DEFB107AQ8IZN7 70 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 LRRC18Q8N456 261 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 SIGLECL1Q8N7X8 197 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 SLC25A40Q8TBP6 338 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 IPCEF1Q8WWN9 437 aaPredicted RBP11□□□□□ -0.65
HDAC6-227ENST00000485102 BTBD10Q9BSF8 475 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 TRIM15Q9C019 465 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 SLITRK2Q9H156 845 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 TUBG2Q9NRH3 451 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 RPS6KA6Q9UK32 745 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 SLC7A7Q9UM01 511 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 NPTNQ9Y639 398 aa11□□□□□ -0.65
HDAC6-227ENST00000485102 C5orf49A4QMS7 147 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms