RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 SLC35E2BP0CK96 405 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SMIM18P0DKX4 95 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 PPIAL4FP0DN26 164 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 M6PRP20645 277 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 NKX2-1P43699 371 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 OR1D4P47884 311 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 CDX1P47902 265 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 COMPP49747 757 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 FOXE3Q13461 319 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 IGFBP7Q16270 282 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 TATDN3Q17R31 274 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ACER2Q5QJU3 275 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 HES5Q5TA89 166 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 C1orf189Q5VU69 101 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF770Q6IQ21 691 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 NAPRTQ6XQN6 538 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 RNF111Q6ZNA4 994 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ADGRE4PQ86SQ3 457 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 HIPK1Q86Z02 1210 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 IZUMO1Q8IYV9 350 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 OR5M3Q8NGP4 307 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 NANPQ8TBE9 248 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 GIPC3Q8TF64 312 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 FAM222BQ8WU58 562 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SPRYD4Q8WW59 207 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SLC38A2Q96QD8 506 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 DCLRE1CQ96SD1 692 aaKnown RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF717Q9BY31 904 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ENKD1Q9H0I2 346 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ASF1BQ9NVP2 202 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 DHDHQ9UQ10 334 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 YARS2Q9Y2Z4 477 aaKnown RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 PPIAL4AQ9Y536 164 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ASH1LQ9NR48 2969 aaKnown RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 A0A0A6YYD5 115 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SH3PXD2BA1X283 911 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 HMX2A2RU54 273 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ADARB2-AS1A8MUL3 147 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 LDB3O75112 727 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 GUSBP08236 651 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 GSTA1P08263 222 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 BMP4P12644 408 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 KIR2DL3P43628 341 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SLC6A8P48029 635 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ELLP55199 621 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 VLDLRP98155 873 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 STX4Q12846 297 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 UBE2V1Q13404 147 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ARL6IP1Q15041 203 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 FBXL19-AS1Q494R0 122 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 VWA2Q5GFL6 755 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SOHLH1Q5JUK2 328 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 NSUN5P2Q63ZY6 315 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 EMBQ6PCB8 327 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 CCDC190Q86UF4 302 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ADGRG3Q86Y34 549 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 TGIF2LXQ8IUE1 241 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 TMEM151AQ8N4L1 468 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 OR6Q1Q8NGQ2 317 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 OR9A4Q8NGU2 314 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 OR52E5Q8NH55 327 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 PIWIL2Q8TC59 973 aaKnown RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 NAT14Q8WUY8 206 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 MOB3AQ96BX8 217 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 MTBPQ96DY7 904 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 CMTM7Q96FZ5 175 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 LPAR4Q99677 370 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 DHRS9Q9BPW9 319 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 PCGF1Q9BSM1 259 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 DPAGT1Q9H3H5 408 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 CDC42EP4Q9H3Q1 356 aaKnown RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 THUMPD1Q9NXG2 353 aaKnown RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 NKX1-2Q9UD57 310 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 PLEKHB1Q9UF11 243 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF223Q9UK11 482 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 KLF13Q9Y2Y9 288 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 EML6Q6ZMW3 1958 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 LOC105371242A0A075B767 164 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 A0A1W2PNV4 684 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 USP27XA6NNY8 438 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 RNASEK-C17orf49H0YIS7 233 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 RAD51CO43502 376 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SPRY2O43597 315 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 PSPNO60542 156 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 STK16O75716 305 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 WDPCPO95876 746 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 TXNDC12O95881 172 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 MBPP02686 304 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ETFAP13804 333 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 BMP5P22003 454 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 GLRA1P23415 457 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 DCTP40126 519 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 XCR1P46094 333 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 TGM4P49221 684 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 NKX2-5P52952 324 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-205ENST00000485055 KCNK10P57789 538 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 PLP1P60201 277 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF45Q02386 682 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 OC90Q02509 493 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms