RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 IKZF5Q9H5V7 419 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM38AQ9H6F2 299 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 SIAEQ9HAT2 523 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 PATZ1Q9HBE1 687 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 CCNB1IP1Q9NPC3 277 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 SLCO1B3Q9NPD5 702 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 CYSLTR2Q9NS75 346 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM106BQ9NUM4 274 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 VAPAQ9P0L0 249 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF229Q9UJW7 825 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ZDHHC8Q9ULC8 765 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 POLR3KQ9Y2Y1 108 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 N6AMT1Q9Y5N5 214 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ARHGAP32A7KAX9 2087 aa6.21□□□□□ -1.41
CSDE1-206ENST00000483030 IGKV1D-43A0A0B4J1Z2 117 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 A0A1W2PRG6 482 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 A6NHS1 94 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 EVPLLA8MZ36 301 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 MCIDASD6RGH6 385 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 BOLA2-SMG1P6H3BVE0 249 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 M0QX08 132 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 MGRN1O60291 552 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 TRMUO75648 421 aaKnown RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 SLC2A10O95528 541 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 BPNT1O95861 308 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 OPN1SWP03999 348 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 CD55P08174 381 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 GPX2P18283 190 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 PPIBP23284 216 aaKnown RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 MTNR1AP48039 350 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 UGT2B15P54855 530 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 ERVK-25P63136 954 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 MRPS34P82930 218 aaKnown RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 PAX8Q06710 450 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 RPL18Q07020 188 aaKnown RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 PSG7Q13046 419 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 CDK5R2Q13319 367 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 ZMYND11Q15326 602 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 TMEM155Q4W5P6 130 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 TNFAIP8L3Q5GJ75 292 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 C10orf128Q5T292 105 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 UNQ6126/PRO20091Q6UXV3 157 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 RFPL4BQ6ZWI9 263 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 CCDC80Q76M96 950 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 NANOGNBQ7Z5D8 188 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 TSPYL5Q86VY4 417 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 KIR3DL3Q8N743 410 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 DRAXINQ8NBI3 349 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 NOXO1Q8NFA2 376 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 GPR32P1Q8NGA4 272 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 OR4D11Q8NGI4 311 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 VANGL1Q8TAA9 524 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 ADAMTS16Q8TE57 1224 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 ASB10Q8WXI3 467 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 NSMAFQ92636 917 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 SPDL1Q96EA4 605 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 DIRC2Q96SL1 478 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 SEPHS2Q99611 448 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 SLC19A3Q9BZV2 496 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 EVA1AQ9H8M9 152 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 PDP1Q9P0J1 537 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-206ENST00000483030 SLC7A7Q9UM01 511 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 UGT2A1Q9Y4X1 527 aa6.21□□□□□ -1.42
CSDE1-206ENST00000483030 TRBV5-3A0A0A0MS03 114 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 MDFIC2A0A1B0GVS7 189 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 TMEM120BA0PK00 339 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 TRAPPC13A5PLN9 417 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 FAM181BA6NEQ2 426 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 A8MXK9 166 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 CENPBD1B2RD01 187 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 TIMM8AO60220 97 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-206ENST00000483030 KNG1P01042 644 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 WNT2P09544 360 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 TNFRSF1AP19438 455 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 FUT1P19526 365 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 LAP3P28838 519 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 AQP2P41181 271 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ARHGDIAP52565 204 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ZNF133P52736 654 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-206ENST00000483030 STX1BP61266 288 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 BTG1P62324 171 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 FMODQ06828 376 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ESCO2Q56NI9 601 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ZMAT1Q5H9K5 638 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 MTX3Q5HYI7 312 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ARMC4Q5T2S8 1044 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 FAM27BQ5VT28 67 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 CCBE1Q6UXH8 406 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-206ENST00000483030 C17orf107Q6ZR85 190 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 C9orf139Q6ZV77 190 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ZER1Q7Z7L7 766 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 C1orf174Q8IYL3 243 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 PARP8Q8N3A8 854 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 MREGQ8N565 214 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ZNF283Q8N7M2 679 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 C11orf65Q8NCR3 313 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 OR2Z1Q8NG97 314 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 MOSPD2Q8NHP6 518 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 HDAC2Q92769 488 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms